DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18754 and CG17477

DIOPT Version :9

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster


Alignment Length:252 Identity:54/252 - (21%)
Similarity:99/252 - (39%) Gaps:47/252 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 GAENAELNEYPWMVLL-------LYENRLSLIRYVLTAAHCVIGGYLTQNDLVLKSVRLGESTT- 164
            |.:||...:.|:.|.|       |....:...|:::||.|||.|...::..:...::|..|... 
  Fly    29 GGQNAAEGDAPYQVSLQTLLGSHLCGGAIISDRWIITAGHCVKGYPTSRLQVATGTIRYAEPGAV 93

  Fly   165 ---DCITSESRCPHLDVEVGQTTVHQGFTSSGGTYRNDIALLRLQFPVRYTKKIQPICLLDAEFP 226
               |.|                .:|..:.|.  .|:|||.||.|...:.:....|.:.|..:.||
  Fly    94 YYPDAI----------------YLHCNYDSP--KYQNDIGLLHLNESITFNALTQAVELPTSPFP 140

  Fly   227 LQDLNLQISGWDPTKSSQTLITSTVKER----NPADCLNRYPSFRSAS----QVCAGGQRKGDTC 283
            .....|..:||....::.:|.:...:.:    |...|.:...::....    .:||..|.....|
  Fly   141 RGASELVFTGWGSQSAAGSLPSQLQRVQQQHLNSPACESMMSAYEDLELGPCHICAYRQANIGAC 205

  Fly   284 AGISGSPVMGIMGSGVDEFVFLAGIASYGQQYCYSAGIPGVYTKIGHFSEWIKANLA 340
            .|.||.|   ::..|.     |.||.::... | :.|:|.::..|.::.:|::..::
  Fly   206 HGDSGGP---LVHQGT-----LVGILNFFVP-C-AQGVPDIFMNIMYYRDWMRQTMS 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 35..84 CDD:288855
Tryp_SPc 108..338 CDD:238113 54/248 (22%)
Tryp_SPc 108..335 CDD:214473 53/245 (22%)
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 54/248 (22%)
Tryp_SPc 27..246 CDD:214473 53/244 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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