DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18754 and modSP

DIOPT Version :10

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster


Alignment Length:280 Identity:73/280 - (26%)
Similarity:100/280 - (35%) Gaps:56/280 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 KQTCGQ-TTPVFR-DRGAENAELNEYPWMV-LLLYENRL--------SLIR--YVLTAAHCVIG- 144
            :|.||| .||:.: ..|.........||.| |.::.|..        ||:.  .|:||||||.. 
  Fly   355 EQDCGQLATPIKQFSSGGYTINNTVVPWHVGLYVWHNEKDYHFQCGGSLLTPDLVITAAHCVYDE 419

  Fly   145 ------GYLTQNDLVLKSVR-LGESTTDCITSESRCPHLDVEVGQTTVHQGFTSSGGTYRNDIAL 202
                  .|.|...:..|..| .||:|.:    |.|   .||.:  ..:..|:......|..|:||
  Fly   420 GTRLPYSYDTFRVIAAKFYRNYGETTPE----EKR---RDVRL--IEIAPGYKGRTENYYQDLAL 475

  Fly   203 LRLQFPVRYTKKIQPICLLDAEFP-----LQDLNLQISGWDPTKSSQTLITSTVKERNPADCLNR 262
            |.|..|...:..|:|||:..|.|.     ..|:..:.:||:.....:......|.:.|.. |...
  Fly   476 LTLDEPFELSHVIRPICVTFASFAEKESVTDDVQGKFAGWNIENKHELQFVPAVSKSNSV-CRRN 539

  Fly   263 YPSFRSASQVCAGGQRKGDTCAGISGSPVMGIMGSGVDEFV------------FLAGIASYGQQY 315
            ....: |.:.|...|.|...|.|.||       |....|..            ||.|:.|.....
  Fly   540 LRDIQ-ADKFCIFTQGKSLACQGDSG-------GGFTSELPTNAFSTWNTARHFLFGVISNAPNA 596

  Fly   316 CYSAGIPGVYTKIGHFSEWI 335
            ...|....|.|.|.||.:.|
  Fly   597 DQCAHSLTVMTNIQHFEDMI 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 36..84 CDD:463440
Tryp_SPc 108..338 CDD:238113 67/264 (25%)
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 66/262 (25%)
Blue background indicates that the domain is not in the aligned region.

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