DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18754 and Sb

DIOPT Version :9

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_001287355.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster


Alignment Length:354 Identity:92/354 - (25%)
Similarity:147/354 - (41%) Gaps:76/354 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SSCQKDEKCTRLVSCSP------LMNILRPRGMTQAEKDVFAHRQCGLDPNGHELLHMVYVCCPE 86
            ::..|....||.:|.|.      :.:..||...|        ||...|..:|.|...:.....|:
  Fly   459 TTSSKTPTTTRPISSSSSSSSGIVTSSQRPTQPT--------HRTPVLATSGIETNEISDSSIPD 515

  Fly    87 LG------DVLPNKQTCGQTT---PVFRDRGAENAELNEYPWMV------------------LLL 124
            .|      .:...:..||..|   |..|..|.::|....:||.|                  .|:
  Fly   516 AGALGHVKTISAARSECGVPTLARPETRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALI 580

  Fly   125 YENRLSLIRYVLTAAHCVIGGYLTQNDLVLKSVRLGESTTDCITSESRCPHLDVEVGQTTVHQGF 189
            .||      ::.||.|||       :||::..:|:.....|....:.:.|:::..|.:..||..:
  Fly   581 NEN------WIATAGHCV-------DDLLISQIRIRVGEYDFSHVQEQLPYIERGVAKKVVHPKY 632

  Fly   190 TSSGGTYRNDIALLRLQFPVRYTKKIQPICLLDAEFPLQDLNLQISGWDPTKSSQTLITSTVKER 254
              |..||..|:||::|:.|:.:...:.||||.:.:..|..:|..::||.......|| .|.::|.
  Fly   633 --SFLTYEYDLALVKLEQPLEFAPHVSPICLPETDSLLIGMNATVTGWGRLSEGGTL-PSVLQEV 694

  Fly   255 NPA-----DCLNRYPSFRSASQ-------VCAGGQRKG-DTCAGISGSPVMGIMGSGVDEFVFLA 306
            :..     :|.:.:  .|:..|       :|||.:..| |:|.|.||.|   :.....|...|||
  Fly   695 SVPIVSNDNCKSMF--MRAGRQEFIPDIFLCAGYETGGQDSCQGDSGGP---LQAKSQDGRFFLA 754

  Fly   307 GIASYGQQYCYSAGIPGVYTKIGHFSEWI 335
            ||.|:|.. |..|.:|||.|:|..|:.||
  Fly   755 GIISWGIG-CAEANLPGVCTRISKFTPWI 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 35..84 CDD:288855 12/54 (22%)
Tryp_SPc 108..338 CDD:238113 72/259 (28%)
Tryp_SPc 108..335 CDD:214473 70/257 (27%)
SbNP_001287355.1 Tryp_SPc 543..782 CDD:214473 71/260 (27%)
Tryp_SPc 544..785 CDD:238113 72/261 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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