DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18754 and snk

DIOPT Version :10

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:359 Identity:97/359 - (27%)
Similarity:141/359 - (39%) Gaps:119/359 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LAECVRLSSCQKDEKCTRLVSCSPLMNILRPRGMTQAEKDVFAHRQC--------GLDPNGHELL 77
            ||:.:..:.||:.....|.:.       |...|.|      |:.:||        |..|..|.|.
  Fly   146 LAQRISATKCQEYNAAARRLH-------LTDTGRT------FSGKQCVPSVPLIVGGTPTRHGLF 197

  Fly    78 -HMVYVCCPELG----------DVLPNKQTCGQTTPVFRDRGAENAELNEYPWMVLLLYENRLSL 131
             ||.     .||          |:   |..||         ||..:||                 
  Fly   198 PHMA-----ALGWTQGSGSKDQDI---KWGCG---------GALVSEL----------------- 228

  Fly   132 IRYVLTAAHCVIGGYLTQNDLVLKSVRLGESTTDCITSESRCPHLDVEVGQTTVHQGFTSSGGTY 196
              ||||||||...|....:     .||||...    .:|:.....|:::....:|..:.||  .|
  Fly   229 --YVLTAAHCATSGSKPPD-----MVRLGARQ----LNETSATQQDIKILIIVLHPKYRSS--AY 280

  Fly   197 RNDIALLRLQFPVRYTKKIQPICLLDAEFP-LQDLNLQISGWDPT-----KSS------------ 243
            .:|||||:|...|:::::::|.||.  :.| ||...:..:||..|     ||:            
  Fly   281 YHDIALLKLTRRVKFSEQVRPACLW--QLPELQIPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQ 343

  Fly   244 QTLITSTVKERNPADCLNRYPSFRSASQVCAG---GQRKGDTCAGISGSPVMGIMGSGVDEF--- 302
            .|......|||       |.|......|.|||   |.|  |||.|.||.|:..::    .|:   
  Fly   344 MTCKQIYRKER-------RLPRGIIEGQFCAGYLPGGR--DTCQGDSGGPIHALL----PEYNCV 395

  Fly   303 VFLAGIASYGQQYCYSAGIPGVYTKIGHFSEWIK 336
            .|:.||.|:| ::|.:...|||||::..:.:||:
  Fly   396 AFVVGITSFG-KFCAAPNAPGVYTRLYSYLDWIE 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 36..84 CDD:463440 13/56 (23%)
Tryp_SPc 108..338 CDD:238113 74/253 (29%)
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 86/306 (28%)
Blue background indicates that the domain is not in the aligned region.

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