DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18754 and CG18179

DIOPT Version :10

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_648340.1 Gene:CG18179 / 39124 FlyBaseID:FBgn0036023 Length:268 Species:Drosophila melanogaster


Alignment Length:263 Identity:59/263 - (22%)
Similarity:94/263 - (35%) Gaps:66/263 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 GAENAELNEY-------PWMVLLLYE-----------NRLSLIRYVLTAAHCVIGGYLT------ 148
            |||...:|.|       |::|.||..           ..:....::||||||:...|:.      
  Fly    35 GAEGRIVNGYPAPEGKAPYIVGLLIRTDGSNSAAVGAGTIIASDWILTAAHCLTTDYVEIHYGSN 99

  Fly   149 --QNDLVLKSVRLGESTTDCITSESRCPHLDVEVGQTTVHQGFTSSGGTYRNDIALLRLQFPVRY 211
              .|....:|||     .|...|                |..:.:.||   .||.|:|.. .|.:
  Fly   100 WGWNGAFRQSVR-----RDNFIS----------------HPNWPAEGG---RDIGLIRTP-SVGF 139

  Fly   212 TKKIQPICL---LDAEFPLQDLNLQISGW---DPTKSSQTLITSTVKERNPADCLNRYPSFRSAS 270
            |..|..:.|   .:......|......||   |....:..|....|:..:.::|...|.:..| :
  Fly   140 TDLINKVALPSFSEESDRFVDTWCVACGWGGMDNGNLADWLQCMDVQIISNSECEQSYGTVAS-T 203

  Fly   271 QVCAGGQRKGDTCAGISGSPVMGIMGSGVDEFVFLAGIASYGQQYCYSAGIPGVYTKIGHFSEWI 335
            .:|........:|.|.||.|::      ..:...|.|:.::|...|:|.  |..||::..:..||
  Fly   204 DMCTRRTDGKSSCGGDSGGPLV------THDNARLVGVITFGSVDCHSG--PSGYTRVTDYLGWI 260

  Fly   336 KAN 338
            :.|
  Fly   261 RDN 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 36..84 CDD:463440
Tryp_SPc 108..338 CDD:238113 58/261 (22%)
CG18179NP_648340.1 Tryp_SPc 40..263 CDD:238113 55/256 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.