DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18754 and CLIPC1

DIOPT Version :9

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_552698.3 Gene:CLIPC1 / 3291827 VectorBaseID:AGAP008835 Length:389 Species:Anopheles gambiae


Alignment Length:368 Identity:95/368 - (25%)
Similarity:150/368 - (40%) Gaps:96/368 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RLVS-CSPLMNILRPRGMTQAEKDVFAHRQCGLDPNGHELLHMVYVCCPELGDVLPNKQTCGQTT 101
            |:|| |:|:::.:|.|.....        :||.      :..:..||||::| ..|...|...||
Mosquito    45 RIVSECAPVIDDIRNRRGNPT--------KCGF------IDRVQIVCCPQVG-TTPAAATTPSTT 94

  Fly   102 P-----------------VFRDR---------------------------GAENAELNEYPWMVL 122
            |                 ||...                           ..|.|:..|:|.|.|
Mosquito    95 PRNEHQRVAEKCAEYGQAVFSKEYVNSLTASEPKLQTIDKCGHTAVELIVDGELAKAREFPHMAL 159

  Fly   123 LLY----ENRL----SLI--RYVLTAAHCVIGGYLTQNDL-VLKSVRLGESTTDCITSESRCPHL 176
            :.:    |.|.    ||:  |::|||.||     ||..:. ....|||||.:....|.|: .|. 
Mosquito   160 IGFGEAPEIRYLCGGSLVSDRFILTAGHC-----LTSTNFGPATIVRLGELSLASSTDEA-FPE- 217

  Fly   177 DVEVGQTTVHQGFTSSGGTYRNDIALLRLQFPVRYTKKIQPICL-LDAEFPLQDLNLQISGWDP- 239
            |.::.:...|..:..:  ::.|||||::|...|.::...:|||| |.|..|.:  ....:||.. 
Mosquito   218 DYDIAERIPHPEYKQT--SHYNDIALIKLNRKVIFSPYARPICLPLQAAIPQK--RAIATGWGAI 278

  Fly   240 ---TKSSQTLITSTVKERNPADCLNRYPSFR-------SASQVCAGGQRK-GDTCAGISGSPVMG 293
               .:.|..|:..|:......:|.:::...|       :.:|:|||.:.. .|||.|.||.|:..
Mosquito   279 GFGLEQSSALLKVTLDMFRFEECKDQFEPTRKLRTGLNATTQLCAGSRNSTKDTCQGDSGGPLQV 343

  Fly   294 IMGSGVDEFVFLAGIASYGQQYCYSAGIPGVYTKIGHFSEWIK 336
            ...:.|.....:.|:.|:||. |..||:|.|||.:..:..||:
Mosquito   344 YNDANVYCTYTIIGVTSFGQN-CGLAGVPAVYTTVYSYLSWIE 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 35..84 CDD:288855 10/46 (22%)
Tryp_SPc 108..338 CDD:238113 74/253 (29%)
Tryp_SPc 108..335 CDD:214473 72/250 (29%)
CLIPC1XP_552698.3 CLIP 39..79 CDD:197829 11/47 (23%)
Tryp_SPc 143..386 CDD:238113 74/255 (29%)
Tryp_SPc 143..384 CDD:214473 72/252 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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