DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18754 and Tmprss3

DIOPT Version :9

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_038954650.1 Gene:Tmprss3 / 309665 RGDID:1310135 Length:454 Species:Rattus norvegicus


Alignment Length:420 Identity:106/420 - (25%)
Similarity:156/420 - (37%) Gaps:114/420 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VYILVLLQAIFFNQLAECVRLSSCQKDEKCTRLVS-CSPLMN---------ILRPRGMTQAEKDV 61
            :..|:|..||......:|.....|....||..|.: |..:.|         .:|..|. :|...|
  Rat    56 IIALILALAIGLGIHFDCSGKYRCHSSFKCIELTARCDGVPNCKDGEDEYRCVRVSGQ-RAALQV 119

  Fly    62 FA----HRQCGLDPNGHELLHMVYVCCPELG---------------------------DVLPNKQ 95
            |.    ...|..|...    |...:.|.:||                           .:||:.:
  Rat   120 FTAAAWRTMCSDDWKS----HYAKIACAQLGFPSYVSSDHLRVDALEEQFQGDFVSINHLLPDDK 180

  Fly    96 -------------------------TCGQTT---PVFRDRGAENAELNEYPWMVLLLYENRL--- 129
                                     .||..|   |  |..|...:.|.::||.|.|.::...   
  Rat   181 VTALHHSVYMREGCTSGHVVTLKCSACGMRTGYSP--RIVGGNVSSLTQWPWQVSLQFQGYHLCG 243

  Fly   130 -SLIR--YVLTAAHCVIGGYLTQNDLVLKSVRLGESTTDCITS--ESRCP-HLDVEVGQTTVHQG 188
             |:|.  :::||||||...|..::    .:|::|      :.|  :|..| ||   |.:...|..
  Rat   244 GSVITPLWIVTAAHCVYDLYHPKS----WTVQVG------LVSLMDSPVPSHL---VEKIIYHSK 295

  Fly   189 FTSSGGTYRNDIALLRLQFPVRYTKKIQPICLLDAEFPLQDLNL-QISGWDPTK-----SSQTLI 247
            :...  ...|||||::|..|:.:.:.||||||.::|....|..| ..|||..|:     :|..|.
  Rat   296 YKPK--RLGNDIALMKLSEPLTFDETIQPICLPNSEENFPDGKLCWTSGWGATEDGAGDASPVLN 358

  Fly   248 TSTVKERNPADCLNR--YPSFRSASQVCAGGQRKG-DTCAGISGSPVMGIMGSGVDEFVFLAGIA 309
            .:.|...:...|.:|  |....|.|.:|||..:.| |:|.|.||.|::    ........|.|..
  Rat   359 HAAVPLISNKICNHRDVYGGIISPSMLCAGYLKGGVDSCQGDSGGPLV----CQERRLWKLVGAT 419

  Fly   310 SYGQQYCYSAGIPGVYTKIGHFSEWIKANL 339
            |:|.. |.....|||||:|..|.:||...|
  Rat   420 SFGIG-CAEVNKPGVYTRITSFLDWIHEQL 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 35..84 CDD:288855 13/62 (21%)
Tryp_SPc 108..338 CDD:238113 76/247 (31%)
Tryp_SPc 108..335 CDD:214473 74/244 (30%)
Tmprss3XP_038954650.1 LDLa 74..107 CDD:238060 6/32 (19%)
SRCR_2 112..211 CDD:406055 14/103 (14%)
Tryp_SPc 216..444 CDD:214473 75/247 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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