DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18754 and Tmprss11e

DIOPT Version :9

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_038948843.1 Gene:Tmprss11e / 305265 RGDID:1561698 Length:444 Species:Rattus norvegicus


Alignment Length:337 Identity:85/337 - (25%)
Similarity:141/337 - (41%) Gaps:63/337 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RLSSCQKDEKCTRLVSCSPLMNILRPRGMTQAEKDVFAHRQCGLDPNGHELL--------HMVYV 82
            |:.|.:..|...:::.     .:||       ||..:|.....:||...|:.        :.:..
  Rat   144 RIRSTEDPEVVHKIIE-----YVLR-------EKLKYATGPPKVDPESVEIKKINKTESDNYLNH 196

  Fly    83 CCPELGDVLPNKQTCGQTTPVFRDRGAENAELNEYPWMVLLLYENR----LSLI--RYVLTAAHC 141
            ||    ....||.| .||:  .|..|..:||..|:||...|.::..    .:||  .::::||||
  Rat   197 CC----GTRRNKST-AQTS--VRIVGGTSAEEGEWPWQSSLQWDGSHRCGATLISNTWLVSAAHC 254

  Fly   142 VIGGYLTQNDLVLKSVRLGESTTDCITSESRCPHLDVEVGQTTVHQGFTSSGGTYRNDIALLRLQ 206
                :.|..|....:...|.:.        :.|.|...:.:..||:.:......|  ||||:.|.
  Rat   255 ----FRTHKDPSRWTASFGATL--------QPPKLTTGIRRIIVHEKYNYPSHDY--DIALVELS 305

  Fly   207 FPVRYTKKIQPICLLDAEFPLQ-DLNLQISGWDPTKS---SQTLITSTVKERNPADCLNRYPSFR 267
            .||..|..:..:||.||....| ...:.::|:...::   :|..:.....:.......||..|:.
  Rat   306 RPVPCTNAVHKVCLPDANHEFQPGQRMFVTGFGALRNDGFAQNYLRQVQVDYIDTQTCNRPQSYN 370

  Fly   268 SA---SQVCAG---GQRKGDTCAGISGSPVMGIMGSGVDEFVFLAGIASYGQQYCYSAGIPGVYT 326
            .|   ..:|||   |::  |.|.|.||.|   ::...|.:..:|||:.|:|.: |.....|||||
  Rat   371 GAITPRMLCAGFLKGEK--DACQGDSGGP---LVTPDVRDVWYLAGVVSWGDE-CGQPNKPGVYT 429

  Fly   327 KIGHFSEWIKAN 338
            ::..|.:||.:|
  Rat   430 RVTAFRDWITSN 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 35..84 CDD:288855 8/56 (14%)
Tryp_SPc 108..338 CDD:238113 65/245 (27%)
Tryp_SPc 108..335 CDD:214473 63/242 (26%)
Tmprss11eXP_038948843.1 SEA 71..176 CDD:396113 8/43 (19%)
Tryp_SPc 213..441 CDD:238113 65/247 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.