DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18754 and CG30289

DIOPT Version :10

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_726081.1 Gene:CG30289 / 246532 FlyBaseID:FBgn0050289 Length:316 Species:Drosophila melanogaster


Alignment Length:241 Identity:81/241 - (33%)
Similarity:122/241 - (50%) Gaps:26/241 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 GAENAELNEYPWMVLLLYENRL--SLI--RYVLTAAHCVIGGYLTQNDLVLKSVRLGE-STTD-- 165
            |.....:.|.|||||:......  |||  ::||||||||     :..||.   ||||: .|.|  
  Fly    44 GGAKTNIQENPWMVLVWSSKPCGGSLIARQFVLTAAHCV-----SFEDLY---VRLGDYETLDPM 100

  Fly   166 --CITSESRCPHLDVEVGQTTVHQGFTSSGGTYRNDIALLRLQFPVRYTKKIQPICLLDAEFPLQ 228
              |:.:.......::.|....||:.:  :|.|.:|||||||:...|.|:..::|||||..| .:|
  Fly   101 PYCLNNHCIPKFYNISVDMKIVHENY--NGITLQNDIALLRMSEAVEYSDYVRPICLLVGE-QMQ 162

  Fly   229 DLNL-QISGWDPT---KSSQTLITSTVKERNPADCLNRYPSFRSASQVCAGGQRKGDTCAGISGS 289
            .:.: .::||..|   :.|:.|:.:|:...:.:.|..::......||:|| |....:||.|.||.
  Fly   163 SIPMFTVTGWGETEYGQFSRILLNATLYNMDISYCNIKFNKQADRSQICA-GSHTSNTCKGDSGG 226

  Fly   290 PVMGIMGSGVDEFVFLAGIASYGQQYCYSAGIPGVYTKIGHFSEWI 335
            |:......|.....|..|:.|||.:.| :|.:.||||.:.:..|||
  Fly   227 PLSSKFHYGNRLLSFQYGLVSYGSERC-AANVAGVYTNVSYHREWI 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 36..84 CDD:463440
Tryp_SPc 108..338 CDD:238113 81/241 (34%)
CG30289NP_726081.1 Tryp_SPc 42..271 CDD:238113 79/239 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.