DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18754 and F12

DIOPT Version :9

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_000496.2 Gene:F12 / 2161 HGNCID:3530 Length:615 Species:Homo sapiens


Alignment Length:266 Identity:75/266 - (28%)
Similarity:114/266 - (42%) Gaps:38/266 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 TCGQ-----TTPVFRDRGAENAELNEYPWMVLLLYENRL---SLIR--YVLTAAHCVIGGYLTQN 150
            :|||     .:.:.|..|...|....:|::..|.:.:..   |||.  :|||||||:......::
Human   358 SCGQRLRKSLSSMTRVVGGLVALRGAHPYIAALYWGHSFCAGSLIAPCWVLTAAHCLQDRPAPED 422

  Fly   151 -DLVLKSVRLGESTTDCITSESRCPHLDVEVGQTTVHQGFTSSGGTYRNDIALLRLQFP-----V 209
             .:||...|...|...|.|         :.|....:|:.|  |..:|::|:||||||..     .
Human   423 LTVVLGQERRNHSCEPCQT---------LAVRSYRLHEAF--SPVSYQHDLALLRLQEDADGSCA 476

  Fly   210 RYTKKIQPICL-LDAEFPLQDLNLQISGWDPTKSSQTLITSTVKERN-PADCLNR--YPSFRSAS 270
            ..:..:||:|| ..|..|.:....|::||...........|.::|.. |...|.|  .|....:|
Human   477 LLSPYVQPVCLPSGAARPSETTLCQVAGWGHQFEGAEEYASFLQEAQVPFLSLERCSAPDVHGSS 541

  Fly   271 ----QVCAGGQRKG-DTCAGISGSPVMGIMGSGVDEFVFLAGIASYGQQYCYSAGIPGVYTKIGH 330
                .:|||....| |.|.|.||.|:: ......:..:.|.||.|:|.. |.....|||||.:.:
Human   542 ILPGMLCAGFLEGGTDACQGDSGGPLV-CEDQAAERRLTLQGIISWGSG-CGDRNKPGVYTDVAY 604

  Fly   331 FSEWIK 336
            :..||:
Human   605 YLAWIR 610

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 35..84 CDD:288855
Tryp_SPc 108..338 CDD:238113 71/249 (29%)
Tryp_SPc 108..335 CDD:214473 69/246 (28%)
F12NP_000496.2 FN2 41..88 CDD:128373
EGF_CA 96..131 CDD:238011
FN1 133..173 CDD:238018
EGF 178..206 CDD:278437
Kringle 217..295 CDD:278480