DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18754 and CLIPB13

DIOPT Version :9

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_314336.2 Gene:CLIPB13 / 1275070 VectorBaseID:AGAP004855 Length:410 Species:Anopheles gambiae


Alignment Length:393 Identity:114/393 - (29%)
Similarity:171/393 - (43%) Gaps:83/393 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RKVYILVLLQAIFFNQLAECVRLSSCQKDEKCTRLVSCSPLMNILRPRGMTQ---------AEKD 60
            |.:|.:::........:...:..::|...: ..|.|.|.||..:..|...|.         |...
Mosquito    45 RNIYSIIISPTPPSRGIQNYINRAACSLPD-VPRSVCCQPLEVVPAPTTTTTTTTTTTTTVAPST 108

  Fly    61 VFAHRQ--------CGLDPNGHELLHMVYVCCPELGDVLPNKQTCGQTTPVFRDRGAENAELNEY 117
            |.|..:        .|::|:....|:...:.....|.:..|:...|.||.||           ||
Mosquito   109 VVAPVKTNAGPVMVTGVEPDAGATLNWNLLPTRNCGTITVNRIAHGNTTRVF-----------EY 162

  Fly   118 PWMVLLLYENR--------LSLI--RYVLTAAHCVIGGYLTQNDLVLKSVRLGE----STTDC-- 166
            ||||||.||:.        .|||  ||||||||||    .|.:.:.|..|||||    ...||  
Mosquito   163 PWMVLLRYESNGVLSDRCGGSLINNRYVLTAAHCV----RTSSSIRLVKVRLGEHDKRQQIDCHV 223

  Fly   167 -ITSESRC--PHLDVEVGQTTVHQGFTSSGGTYRNDIALLRLQFPVRYTKKIQPICLLDAEFPL- 227
             ...|..|  |.:||::....||:.: :....:|:||||||:...|.::..::||||     |: 
Mosquito   224 YSDGEKDCADPAVDVDIESMIVHKDY-NRPIKFRHDIALLRMAQEVEFSDSVKPICL-----PVN 282

  Fly   228 QDLNLQ------ISGWDPTKS---SQTLITSTVKERNPADCLNR------YPSFRSASQVCAGGQ 277
            :|:..:      |:||..|:.   |..|:.:.|......:|..:      |.:.....|:||.|:
Mosquito   283 EDVRRKVLPKYIITGWGTTEQQSLSDLLLQAIVNHVPVPECQQKMNENFLYVTLADEWQMCAAGE 347

  Fly   278 RKGDTCAGISGSPVMGIMGSGVD----EFVFLAGIASYGQQYCYSAGIPGVYTKIGHFSEWIKAN 338
            ...|:|.|.||.|    :|..||    :||.. ||.|.|.:.|....:||:||::..:..||.||
Mosquito   348 GLVDSCQGDSGGP----LGFSVDVAGAKFVQF-GIVSAGVRSCGKESVPGIYTRVTSYMNWIVAN 407

  Fly   339 LAP 341
            :.|
Mosquito   408 MKP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 35..84 CDD:288855 13/65 (20%)
Tryp_SPc 108..338 CDD:238113 88/268 (33%)
Tryp_SPc 108..335 CDD:214473 86/265 (32%)
CLIPB13XP_314336.2 CLIP 28..81 CDD:288855 5/36 (14%)
Tryp_SPc 150..404 CDD:214473 91/279 (33%)
Tryp_SPc 151..404 CDD:238113 91/278 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D402896at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24260
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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