DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18754 and CLIPB1

DIOPT Version :9

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_307756.2 Gene:CLIPB1 / 1269160 VectorBaseID:AGAP003251 Length:372 Species:Anopheles gambiae


Alignment Length:376 Identity:116/376 - (30%)
Similarity:183/376 - (48%) Gaps:67/376 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LVLLQAIFFN--QLAECVRL-SSCQ----KDEKCTRLVSCSPLMNI-LRPRGMTQAEKDVFAHRQ 66
            |:||..:|..  .|::.:.| .:|:    |...|..|.||..:.|: |:...||..::.:....:
Mosquito     9 LLLLVCVFCGVIGLSDALNLQDACETPDGKVGTCVYLRSCLSIRNVLLKKENMTPEDRSLVMKSK 73

  Fly    67 CGLDPNGHELLHMVYVCCPELGDV---------LPNKQTCGQTTPVFRDR--GAENAELNEYPWM 120
            ||.:  |..:|    ||||.:..:         ||....||:   :..||  |...:.::.|||:
Mosquito    74 CGQE--GRSVL----VCCPLVRKLTGRFDAPVELPPPGECGK---MQMDRIVGGGVSPIDGYPWL 129

  Fly   121 VLLLY---ENRLS------LI--RYVLTAAHCVIGGYLTQNDLVLKSVRLGE----STTDCITSE 170
            ..:.|   .||..      ||  :||||||||:.|   ..:..::..|||||    :|.||:..:
Mosquito   130 TRIQYYKGSNRYGFHCGGVLIHNQYVLTAAHCIEG---VPSTWIVYQVRLGEFDTTTTIDCVEDD 191

  Fly   171 SRCPHLDVEVGQTTVHQGFTSSGGTYRNDIALLRLQFPVRYTKKIQPICLLDAEFPLQDLNL--- 232
            ...|..||.:....||..:....|...||||||:|...|.:|..|:||||..:| ..:.:||   
Mosquito   192 CADPVRDVLINAYVVHPDYYKQNGADYNDIALLQLSETVEFTDFIRPICLPTSE-ESRTVNLTGK 255

  Fly   233 --QISGWDPTKSSQTLITSTVKE---RNPA----DCLNRYPSFR---SASQVCAGGQRKGDTCAG 285
              .::||..|::|    ||:.|:   |.|.    .|.:.:.|.|   ..:|:||||::..|:|.|
Mosquito   256 YATVAGWGQTENS----TSSTKKLHLRVPVVDNEVCADAFSSIRLEIIPTQLCAGGEKGKDSCRG 316

  Fly   286 ISGSPVMGI-MGSGVDEFVFLAGIASYGQQYCYSAGIPGVYTKIGHFSEWI 335
            .||.|:|.. .|....:..:|.|:.|:|.:.|.:.|:|||||::..:.:|:
Mosquito   317 DSGGPLMRYGDGRSSTKSWYLIGLVSFGLEQCGTDGVPGVYTRMSEYMDWV 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 35..84 CDD:288855 13/49 (27%)
Tryp_SPc 108..338 CDD:238113 86/259 (33%)
Tryp_SPc 108..335 CDD:214473 85/257 (33%)
CLIPB1XP_307756.2 CLIP 32..85 CDD:288855 15/58 (26%)
Tryp_SPc 114..367 CDD:214473 86/260 (33%)
Tryp_SPc 115..367 CDD:238113 85/259 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BI1K
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D402896at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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