DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18754 and CG42694

DIOPT Version :10

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_001188994.1 Gene:CG42694 / 10178792 FlyBaseID:FBgn0261584 Length:512 Species:Drosophila melanogaster


Alignment Length:225 Identity:63/225 - (28%)
Similarity:100/225 - (44%) Gaps:49/225 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 SLI--RYVLTAAHCV-IGGYLTQNDLVLKSVRLGESTTDCITSESRCPHLDVEVGQTTVHQGFTS 191
            |||  ::||:||.|: :.|.|        .|:||      :::.::.||. ..|....:.   :.
  Fly    61 SLISKQFVLSAAQCIDVHGKL--------FVQLG------VSNATKSPHW-YTVSNVVIP---SH 107

  Fly   192 SGGTYRNDIALLRLQFPVRYTKKIQPICL------LDAEFPLQDLNLQISGW-DPTKSSQTLITS 249
            ||...:.||.||:|...|.|...:.|||:      ||....||  |...|.| ...|:.||::.|
  Fly   108 SGKRLQRDIGLLKLSQSVDYNDFVYPICIALNTNTLDMVKILQ--NFTTSAWLSKNKNPQTIVLS 170

  Fly   250 TV-KERNPADCLNRYPSFRSASQVCAGGQRKGDTCAGISGS----PVMGIMGSG-VDEFVFLAGI 308
            .: ::|    |........:..::||...::.::|...|||    |:  |.||. |.|.:|  ||
  Fly   171 QLSRDR----CKLNLSGNVTPKEICAASLQRNNSCFIDSGSALTQPI--IQGSNIVREMLF--GI 227

  Fly   309 ASY--GQQYCYSAGIPGVYTKIGHFSEWIK 336
            ..|  |:.:|..   |.:|..:.....||:
  Fly   228 RGYVNGRSWCSE---PAIYIDVAECVGWIE 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 36..84 CDD:463440
Tryp_SPc 108..338 CDD:238113 63/225 (28%)
CG42694NP_001188994.1 Tryp_SPc 46..253 CDD:473915 61/222 (27%)
Tryp_SPc 319..502 CDD:473915
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.