DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18754 and tmprss6

DIOPT Version :9

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_004913946.2 Gene:tmprss6 / 100489045 XenbaseID:XB-GENE-1011573 Length:806 Species:Xenopus tropicalis


Alignment Length:376 Identity:98/376 - (26%)
Similarity:132/376 - (35%) Gaps:100/376 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NQLAE----CVRLSSCQKDEKCTRLVS----------------CSPLMNILRPRGMTQAEKDVFA 63
            |:|.|    |.....|...|.|..:.|                |:...|.  |.....|.....|
 Frog   471 NELDERNCVCPAQYHCPGAESCISITSVCDGKKDCANGTDEELCNQGANF--PTAACGAFNYKCA 533

  Fly    64 HRQCGLDPNGHELLHMVYVC-----CPELGDVLPNKQTCGQTTPVFRDRGAENAELNEYPWMVLL 123
            ...|...||..        |     ||:..|  .|...||......|..|...|:..|:||...|
 Frog   534 DGSCVQKPNAE--------CDSIADCPDGSD--ENNCGCGIQAVGIRLVGGTQAQEGEWPWQASL 588

  Fly   124 ------LYENRLSLIRYVLTAAHCVI-GGYLTQN--DLVLKSVRLGESTTDCITSESRCPHLDVE 179
                  :....|...:::||||||.. ..|.:..  .:.|..|||..||.         ..|..:
 Frog   589 QVRGEHICGGTLVADQWILTAAHCFTPESYASPEVWTVYLGKVRLSRSTQ---------KELAFK 644

  Fly   180 VGQTTVHQGFTSSGGTYRNDIALLRLQFPVRYTK-KIQPICLLDA--EFPLQDLNLQISGWDPTK 241
            |.:..:|..:......|  |:||:.|...|..|. .:|||||..:  .||... :..::||    
 Frog   645 VIRLVIHPFYDEDSHDY--DVALVLLDHLVPLTSPHVQPICLPSSTHHFPTGS-SCWVTGW---- 702

  Fly   242 SSQTLITSTVKERNPAD---------------CLNRYPSFRSASQVCAGGQRKG--DTCAGISGS 289
                   .:|||..|..               |...|....|...:|| |.|.|  |.|.|.|||
 Frog   703 -------GSVKENGPTSDVLQKVDIQLVAQDICTELYRYQISPRMLCA-GYRDGSKDACQGDSGS 759

  Fly   290 PVMGIMGSGVDEFVFLAGIASYGQQYCYSAGIP---GVYTKIGHFSEWIKA 337
            |::....||   ..|.||:.|:|.    ..|||   |||::|....:||::
 Frog   760 PLVCKTASG---RWFQAGLVSWGA----GCGIPRYFGVYSRITRLVQWIES 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 35..84 CDD:288855 11/69 (16%)
Tryp_SPc 108..338 CDD:238113 74/262 (28%)
Tryp_SPc 108..335 CDD:214473 72/258 (28%)
tmprss6XP_004913946.2 SEA 77..176 CDD:396113
CUB 235..303 CDD:412131
LDLa 448..478 CDD:238060 3/6 (50%)
LDLa 480..514 CDD:238060 5/33 (15%)
LDLa 525..560 CDD:238060 10/44 (23%)
Tryp_SPc 572..804 CDD:238113 74/263 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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