DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18748 and ROD1

DIOPT Version :9

Sequence 1:NP_001097703.1 Gene:CG18748 / 59144 FlyBaseID:FBgn0042105 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_014661.1 Gene:ROD1 / 854183 SGDID:S000005544 Length:837 Species:Saccharomyces cerevisiae


Alignment Length:516 Identity:102/516 - (19%)
Similarity:182/516 - (35%) Gaps:148/516 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 MVAGQVTLSTDKAIQIKAIRLKLKGYAE------------THWTESKTDSNNKS------TSESY 68
            :::|.:.||..:.||||::.|:|.|...            .|...||.:.|..|      ..:||
Yeast    40 LLSGTIVLSITEPIQIKSLALRLFGRLRLNIPTVLQTVHGPHKRYSKFERNIYSHFWDDFNIKSY 104

  Fly    69 --NGFEKYLSSKVYLLGSEISPEMALEP-----------------------------GTRSYNFA 102
              |.::.:.:.|: .:.|:.|..:|..|                             |...:.|:
Yeast   105 FQNLYDNHNNGKI-TISSKSSTNLAALPKRKRALSTASLISSNGQTSASKNYHTLVKGNYEFPFS 168

  Fly   103 CPIPINCPSSFEG-THGRIRYMVDVNIIQPWKYDSIFSRAFTVIQVMDINTYNSVSQVPVQAKTE 166
            ..||.:...|.|| .:..:.|.::..|.:|.:.|.|..:...||:.:.|:.......|.|.    
Yeast   169 AIIPGSLVESVEGLPNAAVTYALEATIERPKQPDLICKKHLRVIRTLAIDAVELSETVSVD---- 229

  Fly   167 KTFGVWPFRSDPLTLELNLPQTGFVPGQTVPANVLIGNESK-IRVHEVKVGLSMMITYYSDLSSG 230
               ..||.:.|   ..:::|......|.:...|:||....| :::..|::.| :..:.|.....|
Yeast   230 ---NSWPEKVD---YTISIPTKAIAIGSSTMINILIVPILKGLKLGPVRISL-VENSQYCGSYGG 287

  Fly   231 SKCERKSVAKLKADGVLRNSRKMY------------------DFQ--------LMIPSTPPSCFH 269
            ...:.:.|||||....|::..::.                  :||        |.||::...|..
Yeast   288 VINQERMVAKLKLKDPLKHVAQIKKKRSLNEAADEGVDTDTGEFQDKWEVRALLNIPASLTKCSQ 352

  Fly   270 LCRI---IKIGYQIEVVAKVKGM--HING-TLIMPVTICGVPISP------SAVQYTPQSSGP-- 320
            .|||   ||:.::|:....:...  ||:. ...:||.:...|..|      ..::.|.::.||  
Yeast   353 DCRILSNIKVRHKIKFTISLLNPDGHISELRAALPVQLFISPFVPVNVKTSDVIERTLKTFGPSY 417

  Fly   321 EAPEQRALTL--------IEGEGAFAPAAPPYPWS------EGSTLS------------------ 353
            :...|...:.        .|.:..|..:|.....|      .||||:                  
Yeast   418 QVTSQHDNSFSSKNFVDDSEEDVIFQRSASALQLSSMPTIVSGSTLNINSTDAEATAVADTTMVT 482

  Fly   354 ----PPNYAEAMH-------SHSDSEKQSESGNAQEKSYKPLYPVFDLSTSTVEKSKEAAL 403
                ||||...::       ::.|....|.|.:|.|.  :.::.:.:|..|....|....|
Yeast   483 SLMVPPNYGNHVYDRVYGEVTNEDETSASASSSAVES--QAIHNIQNLYISDSNNSNNPIL 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18748NP_001097703.1 Arrestin_N 5..151 CDD:278754 37/178 (21%)
Arrestin_C 175..301 CDD:280848 33/158 (21%)
ROD1NP_014661.1 Arrestin_N <157..215 CDD:419887 14/57 (25%)
Arrestin_C 232..395 CDD:214976 35/166 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343415
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11188
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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