DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18748 and SPBC839.02

DIOPT Version :9

Sequence 1:NP_001097703.1 Gene:CG18748 / 59144 FlyBaseID:FBgn0042105 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_595242.1 Gene:SPBC839.02 / 2541205 PomBaseID:SPBC839.02 Length:530 Species:Schizosaccharomyces pombe


Alignment Length:446 Identity:81/446 - (18%)
Similarity:151/446 - (33%) Gaps:141/446 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 MVAGQVTLSTDKAIQIKAIRLKLKGYAETHW--------------------------TESKTDSN 60
            ::.|.:.:...|.:::|.|:|..||.:.|.|                          :|.|.|.|
pombe    98 VLRGSLCIQIYKPVKLKKIQLSFKGKSRTEWPEGIPPKLFDTYEENSIMNHCWVFFHSEQKVDEN 162

  Fly    61 NKSTSESYNGFEKYLSSKVYLLGSEISPEMALEPGTRSYNFACPIPINCPSSFEGTHGRIRYMVD 125
            :.. :..|.....|..:..|....|     ...||...|||..||....|.|.:...||:.|.::
pombe   163 SHG-AVWYKVLPHYADTAHYPRSME-----CFYPGEYVYNFELPISCTYPESIQTDMGRVYYFLE 221

  Fly   126 VNIIQPWKYDSIFSRAFTVIQVMDINTYNSVSQVPVQ---------AKTEKTFGVWPFRSDPLTL 181
            ..:.:    .|.||.             .|..::|::         ..|.:...|.....|.|..
pombe   222 TLVDR----SSTFSG-------------KSTGRIPIELIRSPCSTSVATSEPILVSKSWEDRLHY 269

  Fly   182 ELNLPQTGFVPGQTVPAN---VLIGNESKIRVHEVKVGLSMMITYYSDLSSGSKCERKSVAKLKA 243
            |:.:.:...|.||.||.|   .|:|   :::.|::::.|.....||        |.::||.:.:.
pombe   270 EVQVGEKCVVMGQVVPVNFKFTLLG---EVKFHKLRLFLMERRYYY--------CRQRSVRRKEK 323

  Fly   244 DGVL--------RNSRKMYDFQLMIPSTPPSCFHLCRIIKIGYQIEVVAKVKGMHINGTLIM--P 298
            ...|        :|...:.|::.:.|..              |::....::.|.|.....|:  .
pombe   324 TRQLLLYERSAPKNQCLLSDWKQVRPDV--------------YELSDQVRIPGCHDMAANIVHFD 374

  Fly   299 VTICGVPISPSAVQYTPQSSGPEAPEQRALTLIEGEGAFAPAAPPYP-------WSEGSTLSPPN 356
            .|...:.|: ..|:...:.|...:||      :.|...:.......|       .|:|||:.|  
pombe   375 TTYPNIKIT-HTVRTVLRFSCENSPE------LMGSAKYLEIYIDSPVRLLSCRCSDGSTMLP-- 430

  Fly   357 YAEAMHSHSDSEKQSESGNAQEKSYKPLYPVFDLSTSTVEK------SKEAALDKE 406
                                   :|.|:.|..:::..:::.      :::.|||.:
pombe   431 -----------------------AYCPIIPSSEVNFCSIDNRIIAGMNRDLALDSD 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18748NP_001097703.1 Arrestin_N 5..151 CDD:278754 32/154 (21%)
Arrestin_C 175..301 CDD:280848 26/138 (19%)
SPBC839.02NP_595242.1 Arrestin_N 101..227 CDD:304627 29/135 (21%)
Arrestin_C 263..422 CDD:214976 34/190 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 43 1.000 Inparanoid score I2088
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11188
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.050

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