DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18748 and arrd-8

DIOPT Version :9

Sequence 1:NP_001097703.1 Gene:CG18748 / 59144 FlyBaseID:FBgn0042105 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_496568.1 Gene:arrd-8 / 189457 WormBaseID:WBGene00012467 Length:364 Species:Caenorhabditis elegans


Alignment Length:400 Identity:101/400 - (25%)
Similarity:179/400 - (44%) Gaps:75/400 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGIICQILFHNNTQGVFYAGQMVAGQVTLSTDKAIQIKAIRLKLKGYAETHW----TESKTDSNN 61
            ||....::..::...|:..||.|||::|:....|:...|:::.:.|..||.|    .:.:.|.:.
 Worm     1 MGDTTFLIEFDHPAAVYSPGQNVAGKLTIRNRNALNALALKICIHGDIETLWRKFENKGRYDRHG 65

  Fly    62 K--STSESYNGFEKYLSSKVYLLGSEISPEMALE-------PGTRSYNFACPIPINCPSSFEGTH 117
            :  .:||..|     .:||:.:|.....|..::|       .|...:.|...:|.|.|.||||||
 Worm    66 RWYRSSEHIN-----YTSKINVLEGIAQPWSSIENANNKIPGGVNIFPFLFQLPANLPPSFEGTH 125

  Fly   118 GRIRYMVDVNIIQPWKYDSIFSRAFTVIQVMDIN----TYNSVSQVPVQAKTEKTFGVWPFRSDP 178
            |.:||.|.|.:.:||:.:....|.|:||.|:|:|    |.|     |:...:.|..|:  |.:..
 Worm   126 GNVRYSVHVELDRPWRMNVEAKRVFSVIPVIDLNSIPKTIN-----PMIVSSCKHSGL--FSNKE 183

  Fly   179 LTLELNLPQTGFVPGQTVPANVLIGNESKIRVHEVKVGLSMMITYYSDLSSG---------SKCE 234
            :.:::::|::|::||:|:..:.||.|.:|..::.:|..|...:.|.:...:.         ..||
 Worm   184 VKVKISIPKSGYIPGETIQVSALIQNHTKKPIYSIKAKLEQHVHYQAQQENSHLFPEEHCHKHCE 248

  Fly   235 RK----SVAKL-KADGVLRNSRKMYDFQLMIPSTPPSCFHLCRIIKIGYQIEV-VAKVKGMHING 293
            .|    :::|: |:..|...|....:..|::|:.....|. ..||::.|.|.| :.:.|.:... 
 Worm   249 HKTAQTTMSKVEKSCHVEFCSNSQINVPLVLPNQLVPSFR-TGIIEVDYCIIVDIGENKKLRCE- 311

  Fly   294 TLIMPVTICGVPIS----PSAVQYTPQSSGPEAPE--QRALTLIEGEGAFAPAAPPYPWSEGSTL 352
               :|:|:..:||.    |.|...|      |||.  :....::|...|.||             
 Worm   312 ---LPITVGTIPIGVFTRPIAYSIT------EAPPKYENFSQIVEDSQASAP------------- 354

  Fly   353 SPPNYAEAMH 362
             ||.|....|
 Worm   355 -PPEYENEEH 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18748NP_001097703.1 Arrestin_N 5..151 CDD:278754 46/158 (29%)
Arrestin_C 175..301 CDD:280848 29/140 (21%)
arrd-8NP_496568.1 Arrestin_N 6..159 CDD:334019 46/157 (29%)
Arrestin_C 180..320 CDD:214976 30/144 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164585
Domainoid 1 1.000 95 1.000 Domainoid score I4648
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H119234
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311636at33208
OrthoFinder 1 1.000 - - FOG0000089
OrthoInspector 1 1.000 - - mtm4733
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11188
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X122
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.850

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