DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18748 and arrd-19

DIOPT Version :9

Sequence 1:NP_001097703.1 Gene:CG18748 / 59144 FlyBaseID:FBgn0042105 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_503917.1 Gene:arrd-19 / 178764 WormBaseID:WBGene00018061 Length:471 Species:Caenorhabditis elegans


Alignment Length:474 Identity:135/474 - (28%)
Similarity:213/474 - (44%) Gaps:114/474 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ILFHNNTQGVFYAGQMVAGQVTLSTDK-AIQIKAIRLKLKGYAETHWTES----KTDSNNKSTSE 66
            ::| |....||:.|:.::|:|.|||.| ..:.:|:.:|:.|.|.|.||::    |.::..|.|.|
 Worm     8 VIF-NQPDEVFHPGKPISGRVVLSTTKEKYKARAVNIKILGLAHTSWTDTERVRKVNAEGKETYE 71

  Fly    67 ----SYNGFEKYLSSKVYL-LGSEISPEMALEPGTRSYNFACPIPINCPSSFEGTHGRIRYMVDV 126
                :|:....||...:.| ..|:.|.|:|  .|..::.|:..:|||.|.||||.:|.:||.|..
 Worm    72 TKIVNYSANVNYLDYSLLLWASSDGSNELA--AGEYAWPFSYTLPINVPPSFEGKYGYLRYSVTA 134

  Fly   127 NIIQPWKYDSIFSRAFTVIQVMDINTY-NSVSQVPVQAKTEKTFGVWPFRSDPLTLELNLPQTGF 190
            .|.:||:.|....|..||..::|:|.. ::::|:..||  .:..|...|....|.|.:|:|:|||
 Worm   135 EIDRPWRVDKDKKRCITVSPLIDLN
VIPHALTQINDQA--SENLGCCCFTKGYLELRVNIPKTGF 197

  Fly   191 VPGQTVPANVLIGNESKIRVHEVKVGL-----------SMMITY---YSDLSSG----SKCERKS 237
            |||:|||.|:.|.|.|.:.|.:||..:           ...:||   |...:||    ::.:.::
 Worm   198 VPGETVPMNIHILNHSSVPVTKVKAKIIQQCKFIAYRNGTTVTYDGGYETSTSGMLQETQHDTRT 262

  Fly   238 VAK--LKADGVLRNSRKMYDFQLMIPSTPPSCFHLCRIIKIGYQIEVVAKVKGMHINGTLIMPVT 300
            |.|  |:.....||..| :..:|.:||..|:......:|.:.|.::       .|:..:     |
 Worm   263 VVKQGLEMKVAPRNEHK-FAMELRLPSVTPTINQFSPVITVEYIVQ-------FHVETS-----T 314

  Fly   301 ICG-------------VPIS---PSAVQYTPQS-----------SGPEAPEQRA----------- 327
            .||             ||||   |.|  |.||.           .|..||...|           
 Worm   315 TCGGNVDCEMSILIGTVPISKYLPPA--YYPQDPNLPPSQPTPIGGGVAPAGVAPAGVVPPPGYG 377

  Fly   328 -LTLIEGEGAFA-----PAAPPYPW------------SEGSTL---SPP-NYAEAMHSHSDSEKQ 370
             |.:.:|....|     |..||||.            .:|:.:   :|| :|.|:|:....:|..
 Worm   378 FLPMTDGTDNGAGDTPYPVGPPYPSDVPAPYPSGDEPKDGTVVVPSAPPLSYEESMYGTEGTELN 442

  Fly   371 SESGNAQEKSYKPLYPVFD 389
            ::. |||  .:.|.||||:
 Worm   443 TDE-NAQ--PFAPKYPVFN 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18748NP_001097703.1 Arrestin_N 5..151 CDD:278754 52/153 (34%)
Arrestin_C 175..301 CDD:280848 38/145 (26%)
arrd-19NP_503917.1 Arrestin_N 6..159 CDD:334019 52/153 (34%)
Arrestin_C 182..332 CDD:214976 41/162 (25%)
PHA03247 <338..470 CDD:223021 32/126 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 95 1.000 Domainoid score I4648
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H119234
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46400
OrthoDB 1 1.010 - - D311636at33208
OrthoFinder 1 1.000 - - FOG0000089
OrthoInspector 1 1.000 - - mtm4733
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11188
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X122
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.930

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