DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18748 and arrd-13

DIOPT Version :9

Sequence 1:NP_001097703.1 Gene:CG18748 / 59144 FlyBaseID:FBgn0042105 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_496882.1 Gene:arrd-13 / 175022 WormBaseID:WBGene00011054 Length:460 Species:Caenorhabditis elegans


Alignment Length:450 Identity:126/450 - (28%)
Similarity:204/450 - (45%) Gaps:94/450 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VFYAGQMVAGQVTLSTDK-AIQIKAIRLKLKGYAETHWTE----SKTDSNNKST----SESYNGF 71
            ||:.||.::|:|.|||.| ..:.:|:.:|:.|.|.|.||:    .:.|::.|.:    |..|:..
 Worm    16 VFFPGQPISGRVVLSTTKEKYKARAVNIKILGLAHTSWTDYESVRRVDADGKVSHHRQSVHYSAN 80

  Fly    72 EKYLSSKVYLLG-SEISPEMALEPGTRSYNFACPIPINCPSSFEGTHGRIRYMVDVNIIQPWKYD 135
            ..||...:.|.. .:.|.|:|  .|..:::|:..:|:|.|.||||.:|.:||.|...:.:||:.|
 Worm    81 VNYLDYTLLLWACKDGSNELA--AGEYAWSFSYNLPLNVPPSFEGKYGYLRYSVTAEVDRPWRLD 143

  Fly   136 SIFSRAFTVIQVMDINTY-NSVSQVPVQAKTEKTFGVWPFRSDPLTLELNLPQTGFVPGQTVPAN 199
            ....|..||..::|:|.. ::::|:..||  .:..|...|:...|.|.:|:|:||||||:|||.|
 Worm   144 KAKKRCITVSPLIDLN
VIPHALTQINDQA--SENLGCCCFKKGYLELRVNIPKTGFVPGETVPMN 206

  Fly   200 VLIGNESKIRVHEVKVGL---SMMITY-----------YSDLSSG----SKCERKSVAKLKADGV 246
            :.|.|.|.:.|.|||..:   ...|.|           |....||    :|.:.|:|.|...:..
 Worm   207 IHILNHSSVPVTEVKAKIIQQCKFIAYRNGTTFHYGGGYETGMSGQLQETKHDTKTVVKHGQEMT 271

  Fly   247 L--RNSRKMYDFQLMIPSTPPSCFHLCRIIKIGYQIEV---VAKVKGMHIN-------GTL---- 295
            :  ||..| :..:|.:||..|:......:|.:.|.::.   .:...|..::       ||:    
 Worm   272 VAPRNEHK-FAMELRLPSVTPTINQFSPVITVEYIVQFHVETSSTFGSDVDCEMGILIGTVPIRQ 335

  Fly   296 ---------------IMPVTI-CGVPISPSAVQYTPQSSGPEAPEQRALTLIEGEG-AFAPAAP- 342
                           |:|..| .||...|....:.|.:.|.|          :|.| |..|||. 
 Worm   336 FLPPAYYPQDPNLPQILPTPIGGGVVAPPPGYGFLPMADGSE----------KGAGDASYPAASM 390

  Fly   343 --------PYPWSEGSTL----SPP-NYAEAMHSHSDSEKQSESGNAQEKSYKPLYPVFD 389
                    |||..:..|:    :|| :|.|:|.....:|..::.   .|:.:.|.||||:
 Worm   391 PMYPIPNVPYPSKDDGTVVIPSAPPLSYEESMFGQDGTELNTDE---NEQPFAPKYPVFN 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18748NP_001097703.1 Arrestin_N 5..151 CDD:278754 47/144 (33%)
Arrestin_C 175..301 CDD:280848 44/174 (25%)
arrd-13NP_496882.1 Arrestin_N 6..159 CDD:334019 47/144 (33%)
Arrestin_C 182..332 CDD:214976 42/150 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 95 1.000 Domainoid score I4648
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H119234
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46400
OrthoDB 1 1.010 - - D311636at33208
OrthoFinder 1 1.000 - - FOG0000089
OrthoInspector 1 1.000 - - mtm4733
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11188
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X122
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.930

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