DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18748 and arrd-10

DIOPT Version :9

Sequence 1:NP_001097703.1 Gene:CG18748 / 59144 FlyBaseID:FBgn0042105 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001364600.1 Gene:arrd-10 / 174936 WormBaseID:WBGene00010268 Length:401 Species:Caenorhabditis elegans


Alignment Length:383 Identity:70/383 - (18%)
Similarity:133/383 - (34%) Gaps:119/383 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QVTLSTDKAIQIKAIRLKLKGYAETHWTESKTDSNNKSTSESYNGFEKYLSSKVYLL----GSEI 86
            :::|....|:||.......:|....  |.|..||.:....|     :.::......|    |.::
 Worm    25 ELSLRIPNAVQILESNAVFEGVCRA--TFSGQDSQHTLIKE-----QLHIPFTAIQLPTTKGIDV 82

  Fly    87 SPEMALEPGTRSYNFACPIPINCPSSFEGTHGRI--RYMVDVNIIQPWKYDSIFSRAFTVIQVMD 149
            .||     |.........:|.:.|.:|.|..|.|  |:::.:.:   .::.|.........:.:|
 Worm    83 IPE-----GHHRLPIFLNVPHHMPGTFNGKFGAIVYRFLIKLKV---KRFSSGDEGTIECEKAVD 139

  Fly   150 INTYNSVSQVPVQAKTEKTFGVWPFRSDPLTLELNLPQTGFVPGQ--------------TVPANV 200
            :....|:.|.|..|:             |::::.::.:..|...:              :|..::
 Worm   140 VLGRISLEQQPSFAQ-------------PVSIDRHVKKKAFFMNRLEAHIKFEIERAAYSVGDHI 191

  Fly   201 LIGNESKIR-----VHEVKVGLSMMITYYSDLSSGSKCERKSVAKLKADGVLRNSRKMYDFQLMI 260
            |:..|.|..     :..|.:.|...|.|                   |.|..:.|......:|::
 Worm   192 LVTGEIKNEHLSNPIKHVALELRQHILY-------------------ASGDAQRSDTRLITRLIL 237

  Fly   261 PSTPP----SCFHLCRIIKIGYQI------EVVAKVKGMHINGTLIMPVTIC---GVPI------ 306
            .|.||    :.||       .:|:      .:|.....:.:...|::..:.|   |.|:      
 Worm   238 GSVPPTETFAVFH-------SFQVPFDCYPSLVWNGNPVQVTYELLLTNSGCFEIGTPVFLGNYG 295

  Fly   307 SPSAVQYT---PQSSGPEAPEQRALTLIEGEGAFAPAAPPY--PWSEGS-TLSPPNYA 358
            ||::.:.:   |:|:..|||               |:...|  |.||.| |:.||.|:
 Worm   296 SPNSTRRSIMYPESTSGEAP---------------PSTTYYCVPPSEMSFTVDPPPYS 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18748NP_001097703.1 Arrestin_N 5..151 CDD:278754 24/130 (18%)
Arrestin_C 175..301 CDD:280848 22/154 (14%)
arrd-10NP_001364600.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11188
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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