DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18748 and arrd-4

DIOPT Version :9

Sequence 1:NP_001097703.1 Gene:CG18748 / 59144 FlyBaseID:FBgn0042105 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_496120.1 Gene:arrd-4 / 174540 WormBaseID:WBGene00014159 Length:340 Species:Caenorhabditis elegans


Alignment Length:383 Identity:83/383 - (21%)
Similarity:145/383 - (37%) Gaps:101/383 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FYAGQMVAGQVTLSTDKAIQIKAIRLKLKGYAETH---WTE--SKTDSNNKSTSESYNGFEKYLS 76
            :|.|..|.|.|.|:....:..:.:.:|.:|.:||:   ||:  .|.|...||        |....
 Worm    19 YYPGDTVKGTVVLTNKTPLDARCVTIKCRGKSETYLINWTDLYCKKDLFRKS--------EMVWV 75

  Fly    77 SKVYLLGSEISPEMALEPGTRSYNFACPIPINCPSSFEGTHGRIRYMVDVNIIQPWKYDSIFSRA 141
            ||.   |....||     |...:.|...:||:||.:.||..|...|.|.|.|.:|||.:....:.
 Worm    76 SKD---GQNKMPE-----GGYIWTFEIKLPIDCPPTHEGYAGGTNYKVKVEIDRPWKCNIREEKE 132

  Fly   142 FTVIQVMDI------NTYNSVSQVPVQAKTEKTFGVWPFRSD-PLTLELNLPQTGFVPGQTVPAN 199
            ..|.:.:||      :.|...|.:        ..|:  |.|: |::|::::|...|..|||...:
 Worm   133 IMVTRKLDI
EKKWDQDGYTFTSNL--------RSGI--FSSNGPISLKVSVPTLVFRQGQTAEFH 187

  Fly   200 VLIGNESKIRVHEVKVGLSMMITYYS--------------------DLSSGSKCERKSVAKLKAD 244
            ..:.|.|...::|:.:.....:.|:|                    ..::.|.|..::.| ||.:
 Worm   188 FEVKNHSSSTINEIFIKFGKQVHYHSRNQLTPCRKFDSHSCPLSVYHQTNSSNCIGEATA-LKVN 251

  Fly   245 GVLRNSRKMYDFQLMIPSTPPSCFHLCRIIKIGYQIE--VVAKVKGMHINGTLIMP-----VTIC 302
             |...|.|.......||....:......::..||.:|  :|.|:        ::.|     :.:.
 Worm   252 -VAPYSTKSIILPFTIPEEAKTPSFSTGLVNFGYFMEFGIVTKL--------IVQPRMRATIYVG 307

  Fly   303 GVPISPSAVQYTPQSSGPEAPEQRAL-TLIEGEGAFAPAAPPYPWSEGSTLSPPNYAE 359
            .:|:.        ..:|.:..:.:.: .::|..||                 ||.|:|
 Worm   308 EMPVD--------NVTGKDDEKLKKIKQILESSGA-----------------PPAYSE 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18748NP_001097703.1 Arrestin_N 5..151 CDD:278754 41/144 (28%)
Arrestin_C 175..301 CDD:280848 29/153 (19%)
arrd-4NP_496120.1 Arrestin_N 8..141 CDD:334019 39/137 (28%)
Arrestin_C 163..310 CDD:367164 29/156 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164561
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H119234
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311636at33208
OrthoFinder 1 1.000 - - FOG0000089
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11188
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.850

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