DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18747 and arrdc3b

DIOPT Version :10

Sequence 1:NP_652650.2 Gene:CG18747 / 59143 FlyBaseID:FBgn0042104 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001004605.1 Gene:arrdc3b / 447866 ZFINID:ZDB-GENE-040912-182 Length:412 Species:Danio rerio


Alignment Length:415 Identity:105/415 - (25%)
Similarity:184/415 - (44%) Gaps:51/415 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ISFD---NNKHGTFYAGQLVKGCATLKCDRSKEVQAVLLKVVGYSITKWSE-KSLGS----TKLY 63
            :|:|   ::....|.:|..|.|...::......|:::.:...|.:..:|:| :|.||    |:.:
Zfish    11 VSYDCLNDSNVPVFASGDFVSGRVIVEVTGEIRVRSLNIHAKGLAKVRWTESRSAGSNTAYTRHF 75

  Fly    64 VGREDYLSSNTYLVGSEQNNTHNNTHRLTIEAGVHSYNFTCQLPYQCP--SSFEGRHGCIRYIVK 126
            ....:||:....|:..::::...:.....:.:|.|.:.|:.:|| |.|  :||||:||.:||.||
Zfish    76 TEEVEYLNHRDVLILHDRDDDCCDEAFTVLHSGRHEFPFSLELP-QTPLATSFEGKHGSVRYWVK 139

  Fly   127 VLLIRPWKFDQAYTKGFTVLKMLDLNFDTPQLKSAAHSEGYRTFCCGPCKTDPLKLELHLPQAGY 191
            ..|.|.|.......|.|||.:.:|:|  ||.|.|.......:|.||..|.:.|:.|...:.:.||
Zfish   140 AELHRQWLLPMKTKKEFTVFEHIDIN--TPLLLSPQAGTKDKTLCCWFCTSGPVSLSAKIERKGY 202

  Fly   192 VPGQKIPVTIVVVNNTAVAVSEIRLSLVMLVRYYSVSPEHSRVERL--IISRAKGESVLKQCTRS 254
            .||:.|.: ...:.|.:..|...:.:|.....:::    ..:|:.:  :|:..:|:.:  ...::
Zfish   203 TPGETIQI-FAEIENCSSRVVVPKAALYQTQTFFA----KGKVKEIKQLIANLRGDPL--HSGKT 260

  Fly   255 QTID---LPVPSTPPTCVELSNLIQIAYQLEVEALVKSLREQQLMV-MPVTVGTIPLAVSG---- 311
            :|.|   |.:|...|:.::.| :|.:.|.|.|  .|...|...|.: :|:.:|||||...|    
Zfish   261 ETWDGKMLKIPPISPSILDCS-IIHVEYSLMV--YVDIPRAVNLTLNLPLVIGTIPLHSFGSRTS 322

  Fly   312 IVVQQPPRRSAHYEGPDSRRNPPDELPMVTALE-SLPSDLASSAADSALPNYEESRHTQRGNINE 375
            .|..|.....:....|:....||....::|..| ...|||.:...:...|.|             
Zfish   323 SVSSQCSMAMSWLGLPERPEAPPSYSEIITDEERQCSSDLPAVRDEIEGPLY------------- 374

  Fly   376 EELHAFGSNEFAPLYPVYSIPSPTP 400
            ..:|.|   .|.| .|:||...|.|
Zfish   375 AYIHEF---RFQP-PPLYSEVDPHP 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18747NP_652650.2 Arrestin_N 5..152 CDD:425619 42/154 (27%)
Arrestin_C 176..307 CDD:214976 30/136 (22%)
arrdc3bNP_001004605.1 Arrestin_N 22..165 CDD:451447 40/143 (28%)
Arrestin_C 187..314 CDD:460676 30/136 (22%)

Return to query results.
Submit another query.