DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18747 and Arrdc4

DIOPT Version :10

Sequence 1:NP_652650.2 Gene:CG18747 / 59143 FlyBaseID:FBgn0042104 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001380690.1 Gene:Arrdc4 / 293019 RGDID:1311763 Length:415 Species:Rattus norvegicus


Alignment Length:411 Identity:94/411 - (22%)
Similarity:167/411 - (40%) Gaps:83/411 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FDNNKHGTFYAGQLVKGCATLKCDRSKEVQAVLLKVVGYSITKWSEKSLGSTKLYVGREDYLSSN 73
            |::...|.:.:|:.|.|...|:......::.:.|:..|.:.:.|. .|.|:.....|.....||.
  Rat    21 FEDESKGCYSSGETVAGHVLLEAAEPVTLRGLRLEAQGRATSAWG-PSAGARVCIGGASPAASSE 84

  Fly    74 T-YLVGSEQNNTHNNTHRLTIEA-----------GVHSYNFTCQLPYQ-CPSSFEGRHGCIRYIV 125
            . ||          |.....:||           |.|.:.|..|||.: ..:||.|::|.|:|.|
  Rat    85 VEYL----------NLRLSLLEAPAGEGVTLLQPGKHEFPFRFQLPSEPLATSFTGKYGSIQYCV 139

  Fly   126 KVLLIRPWKFDQAYTKGFTVLKMLDLNFD---TPQLKSAAHSEGYRTFCCGPCKTDPLKLELHLP 187
            :.:|.||...||:..:...|:..:|:|..   ||.||:.....|...|..|     |:.|.:.:.
  Rat   140 RAVLERPQVPDQSVRRELQVVSHVDVN
TPPLLTPMLKTQEKMVGCWLFTSG-----PVSLSVKIE 199

  Fly   188 QAGYVPGQKIPVTIVVVNNTAVAVSEIRLSLVMLVRYYSVSPEHSRVERLIISRAKGESVLKQCT 252
            :.||..|:.||:...:.|.::..|  :..:.:...:.|..|.: ::..|.:::..:|..:     
  Rat   200 RKGYCNGEAIPIYAEIENCSSRLV--VPKAAIFQTQTYLASGK-TKTVRHMVANVRGNHI----- 256

  Fly   253 RSQTID------LPVPSTPPTCVELSNLIQIAYQLEVEALVKSLREQQLMVMPVTVGTIPLAVSG 311
            .|.:.|      |.:|...|:.::.. :|::.|.|.|...:...: :.::.:|:.:||||.:..|
  Rat   257 GSGSTDTWNGKMLKIPPVTPSILDCC-IIRVDYSLAVYIHIPGAK-KLMLELPLVIGTIPYSGFG 319

  Fly   312 IVVQQPPRRSAHYEGPDSRRNPPDELPMVTALESLPSDLASSAADSALPNYEESRHTQRGNINEE 376
                   ||::......|.    |...:..||...|         .|.|||.:.       ::||
  Rat   320 -------RRNSSMASQFSM----DMCWLALALPEQP---------EAPPNYADV-------VSEE 357

  Fly   377 ELHAFGSNEFAPLYPVYSIPS 397
                    ||:...|.|..||
  Rat   358 --------EFSRHIPPYPQPS 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18747NP_652650.2 Arrestin_N 5..152 CDD:425619 39/155 (25%)
Arrestin_C 176..307 CDD:214976 26/136 (19%)
Arrdc4NP_001380690.1 Arrestin_N 19..166 CDD:425619 39/155 (25%)
Arrestin_C 188..315 CDD:214976 27/141 (19%)

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