DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18747 and arrd-16

DIOPT Version :10

Sequence 1:NP_652650.2 Gene:CG18747 / 59143 FlyBaseID:FBgn0042104 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_499629.2 Gene:arrd-16 / 190071 WormBaseID:WBGene00013043 Length:399 Species:Caenorhabditis elegans


Alignment Length:408 Identity:106/408 - (25%)
Similarity:168/408 - (41%) Gaps:87/408 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NNKHGTFYAGQLVKGCATLKCDRSKEVQAVLLKVVGYSITKW--SEKSLGSTKLYVGRE---DYL 70
            :|....:..|..::|..|.....|.:|:|:.:...|.:.|||  ||.|..|.    ||.   .|.
 Worm    10 SNCEQIYEPGGTIEGYVTFDLRESVKVKAIRISAEGLATTKWLLSESSKSSH----GRSREVSYS 70

  Fly    71 SSNTYLVGSEQ-----NNTHNNTHRLTIEAGVHSYNFTCQLPYQCPSSFEGRHGCIRYIVKVLLI 130
            :..||| ..||     :..|:.:   ::..|:|.|.|..|:|...|.||||.||.|||.:|..:.
 Worm    71 AKVTYL-DEEQMVWKPSEGHSKS---SVFPGIHVYPFKFQIPIGVPPSFEGDHGNIRYHMKATVE 131

  Fly   131 RPWKFDQAYTKGFTVLKMLDLN------FDTPQLKSAAHSEGYRTFCCGPCKTDPLKLELHLPQA 189
            ||||.:::.|:..|:|...|||      .:|...||  ...|:..|..|     .:.|::.:|:.
 Worm   132 RPWKTNRSVTRYLTILPPKDLN
KEVLASEETSSWKS--KKVGFFLFRYG-----KVNLQIRIPKK 189

  Fly   190 GYVPGQKIPVTIVVVNNTAVAVSEIRLSLVMLVRY----YSVS-----------PEHSRVERLII 239
            |||||:.|.:...:.|.::..:.:....|:...|:    |.:|           .|:.|    .:
 Worm   190 GYVPGETISIETNIDNMSSRPILKTECYLIQQCRFLAYRYGISGPTDGRRASSLSENDR----YL 250

  Fly   240 SRAKGESVLKQCTRSQTID----------LPVPSTPPTCVELSNLIQIAYQLEVEALVK-SLREQ 293
            ||.:.|..:........|:          |.:|.|.||..  |.||.:.|.:.|:..|| .:|..
 Worm   251 SRKRDEIKIVSVIHEMHIEPRTEHKAKMRLKIPCTCPTFD--STLIHVEYFVVVKLHVKCRMRNT 313

  Fly   294 QLMVMPVTVGTIPLAVSGIVVQQP------------------------PRRSAHYEGPDSRRNPP 334
            .....|:.:|:.|||...:..:.|                        |:...:.:...||.:..
 Worm   314 VKAECPIIIGSKPLADEHVDPRTPTYQEVATFSALTHRSMMSVDEKLTPKYVYYPKYGKSRDDEA 378

  Fly   335 DELPMVTALESLPSDLAS 352
            ||.|.:|.|:..|.|..|
 Worm   379 DEPPSLTDLQLPPIDSLS 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18747NP_652650.2 Arrestin_N 5..152 CDD:425619 49/150 (33%)
Arrestin_C 176..307 CDD:214976 34/156 (22%)
arrd-16NP_499629.2 Arrestin_N 9..153 CDD:425619 49/150 (33%)
Arrestin_C 178..327 CDD:214976 35/159 (22%)

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