DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18747 and arrd-26

DIOPT Version :10

Sequence 1:NP_652650.2 Gene:CG18747 / 59143 FlyBaseID:FBgn0042104 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_500160.2 Gene:arrd-26 / 187599 WormBaseID:WBGene00019873 Length:323 Species:Caenorhabditis elegans


Alignment Length:338 Identity:82/338 - (24%)
Similarity:139/338 - (41%) Gaps:59/338 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EISFDNNKHGTFYAGQLVKGCATLKCDRSKEVQAVLLKVVGYSITKWSEKSLGSTKLYVGRED-- 68
            |::.|......:..|..:||...:.|.:...:..:::::.|.:.|.|.           .|:|  
 Worm     7 EVTLDKGIDEPYLGGDPIKGIIEMVCSKQVRITGLIVRLTGVAETGWR-----------SRQDDL 60

  Fly    69 -YLSSNTYLVGSEQNN-----THNNTHRLTIEAGVHSYNFTCQLPYQCPSSFE-GRHGCIRYIVK 126
             |.|.:|::  .||.:     ..:.|....:..|.||..|..::|....||.| ..||.|||:..
 Worm    61 PYESRHTFM--DEQIDLTTTIAEHCTDEFELHEGKHSVEFEGRIPLDVLSSVERDNHGSIRYMCT 123

  Fly   127 VLLIRPWKFDQAYT--KGFTVLKMLDLNFDTPQLKSAAH--SEGYRTFCCGPCKTDPLKLELHLP 187
            .|:..|...|....  |.|.|..:  ||.|.|.|...||  .|...|.|||..| ..|...:.:.
 Worm   124 ALMAIPEDGDTEVVSEKTFKVFSL--LNL
DAPYLHDKAHVTEEEEITGCCGRRK-GALIATMQVD 185

  Fly   188 QAGYVPGQKIPVTIVVVNNTAVAVSEIR---------LSLVMLVRYYSVSPEHSRVERLIISR-- 241
            :.|.:||....:::.|.|.|......:|         |||...:.:.:|    :|.:.::|.|  
 Worm   186 EIGVMPGMTSKISLTVENKTKKRKKWMRKKDNHECVLLSLCQQLDFVAV----NRNDPMMIDRKS 246

  Fly   242 ------AKGESVLKQCTRSQT--IDLPV-PSTPPTCVELSNLIQIAYQLEVEALVKSLREQQLMV 297
                  :.|....|.....||  |:..| |:.|||.:..:.|:.::|..:::.      :...:|
 Worm   247 ITIAVESHGTCKTKAGVGPQTKEIEFSVPPNLPPTSIHANRLVTVSYFFKLDL------DHFDLV 305

  Fly   298 MPVTVGTIPLAVS 310
            :||.||::..:.|
 Worm   306 LPVIVGSVKSSAS 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18747NP_652650.2 Arrestin_N 5..152 CDD:425619 36/156 (23%)
Arrestin_C 176..307 CDD:214976 33/150 (22%)
arrd-26NP_500160.2 Arrestin_N 6..150 CDD:451447 37/157 (24%)
Arrestin_C 174..314 CDD:460676 33/150 (22%)

Return to query results.
Submit another query.