DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18747 and arrd-17

DIOPT Version :10

Sequence 1:NP_652650.2 Gene:CG18747 / 59143 FlyBaseID:FBgn0042104 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_499816.2 Gene:arrd-17 / 176799 WormBaseID:WBGene00011732 Length:426 Species:Caenorhabditis elegans


Alignment Length:448 Identity:128/448 - (28%)
Similarity:189/448 - (42%) Gaps:89/448 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EISFDNNKHGTFYAGQLVKGCATLKCDRSKEVQAVLLKVVGYSITKWSEKSLGSTKLYVGREDYL 70
            ||.| ||....::|||.:.|...::....|:|..:||::.|.:.|.|::.|..|.|.....|.|.
 Worm     8 EILF-NNPEQAYFAGQEISGKVIIENKEPKKVNEILLELKGRARTYWTKHSGKSRKHCSHSEPYF 71

  Fly    71 SSNTYLVGSEQNNTHNNTHRLTI-----------EAGVHSYNFTCQLPYQCPSSFEGRHGCIRYI 124
                    .||.|. ..||:.|:           .||:|...|:..||...||||||..|.|||.
 Worm    72 --------LEQFNP-GYTHKFTVVKDGKEKERILPAGIHQVPFSYTLPKSLPSSFEGEFGHIRYT 127

  Fly   125 VKVLLIRPWKFDQAYTKGFTVLKMLDLNFDTPQLKSAA---HSEGYRTFCCGPCKTDPLKLELHL 186
            .|.:..|||.||....|.|||:.:.|:|.| |:|...|   .|....||||.  ....:..|:.:
 Worm   128 CKAICERPWDFDIVSRKAFTVVGIEDIN
SD-PKLNEPATCVESNHAVTFCCR--SAGSVTGEIRI 189

  Fly   187 PQAGYVPGQKIPVTIVVVNNTAVAVSEIRLSLVMLVRYYS------VSPEH-SRVERLIISRAKG 244
            .:.||.||:||.|:..|:|.:    |:.|.:.:..|:..:      ...|| ..|.|:|....||
 Worm   190 SKCGYTPGEKIDVSFKVINLS----SKTRTTALRFVQQTTYKAKTFAGHEHIKNVVRVISKIDKG 250

  Fly   245 ESVLKQCTRSQTIDLPVPSTPP---TCVELSNLIQIAYQLEVEALVKSLREQQLMV-MPVTVGTI 305
            |......|..|...:.:||.||   .|    .::.:.|.:|:|.      ||.|.| .|:.:|:|
 Worm   251 EVPGGSTTEWQEESITIPSLPPKLGKC----KILSVTYSVELEV------EQTLTVPCPIVIGSI 305

  Fly   306 PLAVSGIVVQQPPRRSAHYEGPDS------RRNPP----DELPMVTALES--------------- 345
            | .:|.:::..  ::|....|..|      :.:||    :....||..:.               
 Worm   306 P-QLSQLLIHS--KQSVQSAGNGSLPKSSIKDSPPKWDSESCVQVTITDESGQLVEELGNEMEAL 367

  Fly   346 --------LPSDLASSAADS-ALPNYEESRHTQRGNINEEELHAFGSNEFAPLYPVYS 394
                    :||.:.|....: ..|.|:||.........|:|...||...|||.||.|:
 Worm   368 LSARKRVRMPSSILSELYPTMPSPYYKESFFGASDISEEKEQAQFGEASFAPKYPFYT 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18747NP_652650.2 Arrestin_N 5..152 CDD:425619 54/156 (35%)
Arrestin_C 176..307 CDD:214976 38/141 (27%)
arrd-17NP_499816.2 Arrestin_N 7..155 CDD:425619 54/156 (35%)
Arrestin_C 179..307 CDD:460676 39/142 (27%)

Return to query results.
Submit another query.