DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18747 and arrd-1

DIOPT Version :10

Sequence 1:NP_652650.2 Gene:CG18747 / 59143 FlyBaseID:FBgn0042104 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_493774.2 Gene:arrd-1 / 173454 WormBaseID:WBGene00020205 Length:291 Species:Caenorhabditis elegans


Alignment Length:283 Identity:58/283 - (20%)
Similarity:98/283 - (34%) Gaps:87/283 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EISFDNNKHGTFYAGQLVKGCATLKCDRSKEVQAVLLKVVG-----------YSITKWSEKSLGS 59
            :||||.   ..:|.|..:|...::...|....::|:.:..|           |.|. |..|. |.
 Worm     9 DISFDK---PVYYPGDNMKLTVSVDTKRPLNARSVMFRCRGFRNRTVSFLNKYGIA-WICKD-GK 68

  Fly    60 TKLYVGREDYLSSNTYLVGSEQNNTHNNTHRLTIEAGVHSYNFTCQLPYQCPSSFEGRHGCIRYI 124
            .:|.|||            .||                   .|..:|...||.::  :.|.|.|.
 Worm    69 NELPVGR------------LEQ-------------------KFQFELGKDCPPTY--KDGKIIYK 100

  Fly   125 VKVLLIRPWKFDQAYTKGFTVL-KMLD------LNFDTPQLKSAAHSEGYRTFCCGPCKTDPLKL 182
            |::.:.:||.......|.|.:: |:.|      :.:.:.....|..|.|..||            
 Worm   101 VRLEIDQPWSRPLFIEKEFKMV
HKLADQKMSQVMTYTSSPRFDALFSNGQPTF------------ 153

  Fly   183 ELHLPQAGYVPGQKIPVTIVVVNNTAVAVSEIRLSL----VMLVRYYSVSPEHSRVERLIISRAK 243
            ::.:|:....||:.....:.|.|:::..|.:|...|    ..|...|.            .::||
 Worm   154 KVTMPKFTLYPGETTEFKLEVENHSSSTVKKIYAELEAEPFPLYHIYG------------NTKAK 206

  Fly   244 GES---VLKQCTRSQTIDLPVPS 263
            |:.   |....|:..||...:|:
 Worm   207 GKMHVLVAPYSTQKFTIPFTIPT 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18747NP_652650.2 Arrestin_N 5..152 CDD:425619 35/163 (21%)
Arrestin_C 176..307 CDD:214976 18/95 (19%)
arrd-1NP_493774.2 Arrestin_N 8..122 CDD:451447 33/150 (22%)
Arrestin_C 147..269 CDD:214976 22/107 (21%)

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