DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18747 and arrdc4

DIOPT Version :10

Sequence 1:NP_652650.2 Gene:CG18747 / 59143 FlyBaseID:FBgn0042104 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001107732.1 Gene:arrdc4 / 100135736 XenbaseID:XB-GENE-492296 Length:403 Species:Xenopus tropicalis


Alignment Length:441 Identity:105/441 - (23%)
Similarity:181/441 - (41%) Gaps:78/441 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VTCEISFDN-NKHGTFYAGQLVKGCATLKCDRSKEVQAVLLKVVGYSITKWSEKSL-GSTKLYVG 65
            ||..|.::| .|:| :.||:.|.|...|:..|...|.::||:|.|.::|....|.| .:.:.:..
 Frog     5 VTVTIIYENEGKYG-YCAGEPVTGYVLLEVLREIRVLSLLLRVCGGAMTCKQGKQLEDAWEAFPQ 68

  Fly    66 REDYLSSNTYLVGSEQNNTHNNTHRLTIEAGVHSYNFTCQLPYQCP--SSFEGRHGCIRYIVKVL 128
            ...||:....|:    .....:...|...||.|...|..||| :.|  :||.|::|.:.|....:
 Frog    69 ATHYLNEEYSLL----TEPAGDCEILLFPAGNHKIPFRFQLP-ESPLVTSFSGKYGKVYYQTTAV 128

  Fly   129 LIRPWKFDQAYTKGFTVLKMLDLN---FDTPQLKSAAHSEGYRTFCCGPCKTDPLKLELHLPQAG 190
            |.||........:...||..:::|   ..||..:|.....|...|..|     |:.:...:.:.|
 Frog   129 LKRPSVPPHTTHRELRVLSPINVNSPSLYTPVERSKEVMVGCWFFMSG-----PISVNAKIGRKG 188

  Fly   191 YVPGQKIPVTIVVVNNTAVAVSEIRLSLVMLVRYYSVS---PEHSRVERLIISRAKGESVLKQCT 252
            |..|:.|.:...:.|.::      ||.:.....|.:.|   ...:|..|.:::..:|..:     
 Frog   189 YCNGEAIHIYADIENGSS------RLIVPKAAIYQTQSFLLDGKTRTVRQMLASVRGNHI----- 242

  Fly   253 RSQTID------LPVPSTPPTCVELSNLIQIAYQLEVEALVKSLREQQLMVMPVTVGTIPL---- 307
            .|.:.|      |.:|...|:.:| .|:|::.|.|.|...:...::.: :.:|:.:|||||    
 Frog   243 ASGSADSWNGKALKIPPVTPSILE-CNIIRVEYSLAVSINIPGAKKLK-VELPLVIGTIPLNEFN 305

  Fly   308 ------------AVSGIVVQQPPRRSAHYEGPDSRRNPPDELPMVTALESLPSDLASSAADSALP 360
                        .:|.:.:..|       |.|::   ||:...:|:. |.|..|: ||..|  :.
 Frog   306 CRNASVASQFSMDMSWLALALP-------EQPEA---PPNYADIVSE-EDLSRDI-SSMED--IG 356

  Fly   361 NYEESRHTQRGNINEEELHAFGSNEFAPLYPVYSIPSPTPVLTANARNAGF 411
            :..|..|.....:.:|       ..|.| .|:||...|.|..|.:.:|..|
 Frog   357 DVLEGLHCPPFAVIQE-------FRFQP-PPLYSEVDPHPCPTIDGQNVSF 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18747NP_652650.2 Arrestin_N 5..152 CDD:425619 40/150 (27%)
Arrestin_C 176..307 CDD:214976 28/139 (20%)
arrdc4NP_001107732.1 Arrestin_N 10..152 CDD:451447 39/147 (27%)
Arrestin_C 175..301 CDD:214976 29/143 (20%)

Return to query results.
Submit another query.