DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18746 and arrdc3b

DIOPT Version :10

Sequence 1:NP_652649.1 Gene:CG18746 / 59142 FlyBaseID:FBgn0042103 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_001004605.1 Gene:arrdc3b / 447866 ZFINID:ZDB-GENE-040912-182 Length:412 Species:Danio rerio


Alignment Length:425 Identity:97/425 - (22%)
Similarity:175/425 - (41%) Gaps:71/425 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CNNSQG--IFYAGQLISGQVVIKTEKEKSVKAVILNIKGYAETHWADTEHDPDDQSNGESFNGHV 71
            |.|...  :|.:|..:||:|:::...|..|:::.::.||.|:..|.::.....:.:....|...|
Zfish    15 CLNDSNVPVFASGDFVSGRVIVEVTGEIRVRSLNIHAKGLAKVRWTESRSAGSNTAYTRHFTEEV 79

  Fly    72 DYLATR--AYLHGSS----SSIEVLIEPGTSSYRFACQLPIT-CPSSFEGTLGRIRYLVNVRFVR 129
            :||..|  ..||...    .....::..|...:.|:.:||.| ..:||||..|.:||.|.....|
Zfish    80 EYLNHRDVLILHDRDDDCCDEAFTVLHSGRHEFPFSLELPQTPLATSFEGKHGSVRYWVKAELHR 144

  Fly   130 PWKFDLNFNRCFTVIKVMDLNSESLMLRVPSQVESQRTFCCFPCRSSPLSMRLSVPQSGFVPGQI 194
            .|...:...:.|||.:.:|:|:.  :|..|......:|.||:.|.|.|:|:...:.:.|:.||:.
Zfish   145 QWLLPMKTKKEFTVFEHIDINTP--LLLSPQAGTKDKTLCCWFCTSGPVSLSAKIERKGYTPGET 207

  Fly   195 VPVEVMVSNDSGVAVEDITVKLTMVVIYYSQPPSADTNKDRFEMVLKTGGGVSTKCRQQFTFD-- 257
            :.:...:.|.|.      .|.:....:|.:|...|.......:.::....|......:..|:|  
Zfish   208 IQIFAEIENCSS------RVVVPKAALYQTQTFFAKGKVKEIKQLIANLRGDPLHSGKTETWDGK 266

  Fly   258 -LKVPPTPPTCFNLCSIIQIGYQ----VEAEARVKGCHGGQSLHMPITIGSVPL------TKQLQ 311
             ||:||..|:..: ||||.:.|.    |:....|     ..:|::|:.||::||      |..:.
Zfish   267 MLKIPPISPSILD-CSIIHVEYSLMVYVDIPRAV-----NLTLNLPLVIGTIPLHSFGSRTSSVS 325

  Fly   312 KE----------------PRTWGEVLPPQQLDAKA-LILIGSEQNGEALGSPNPWAADPSIAPPS 359
            .:                |.::.|::..::....: |..:..|..|......:.:...|   ||.
Zfish   326 SQCSMAMSWLGLPERPEAPPSYSEIITDEERQCSSDLPAVRDEIEGPLYAYIHEFRFQP---PPL 387

  Fly   360 YAEAKHISPDPHKFSKSKKKSQKRGVKGSQERKAE 394
            |:|.     |||          ...|.||.:|:.:
Zfish   388 YSEV-----DPH----------PDYVCGSMDRRPD 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18746NP_652649.1 Arrestin_N 4..150 CDD:425619 39/149 (26%)
Arrestin_C 174..306 CDD:214976 31/138 (22%)
arrdc3bNP_001004605.1 Arrestin_N 22..165 CDD:451447 37/142 (26%)
Arrestin_C 187..314 CDD:460676 31/138 (22%)

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