DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18746 and Vdup1

DIOPT Version :10

Sequence 1:NP_652649.1 Gene:CG18746 / 59142 FlyBaseID:FBgn0042103 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_612004.2 Gene:Vdup1 / 38023 FlyBaseID:FBgn0035103 Length:342 Species:Drosophila melanogaster


Alignment Length:325 Identity:80/325 - (24%)
Similarity:135/325 - (41%) Gaps:30/325 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NNSQGIFYAGQLISGQVVIKTEKEKSVKAVILNIKGYAETHWADTEHDPDDQSNGESFNGHVDYL 74
            :|:..:::.||.:||:|:|:.:.|.....:..::.|.........:....|:.|         |:
  Fly    13 DNTSLLYFPGQFLSGRVLIELQDETPALGLHFHVVGEGVVRNGRRQERTYDKEN---------YI 68

  Fly    75 ATRAYLHGS-SSSIEVLIEPGTSSYRFACQLPITCPSSFEGTLGRIRYLVNVRFVRPWKFDLNFN 138
            ..|..|.|. ......::.||..|:.|...||:..||:|.|..|.|::..        |..|..|
  Fly    69 DFRMRLLGDVDQGGPAILSPGIHSFPFKLGLPLGLPSTFLGRYGWIQFYC--------KAALREN 125

  Fly   139 --------RCFTVIKVMDLNSESLMLRVPSQVESQRTFCCFPCRSSPLSMRLSVPQSGFVPGQIV 195
                    :.|.|:..:|||.|..:|..|...|.:............:..|:|:.:.|:|||:.:
  Fly   126 NGIIHKNHQVFIVMNPIDLN
LEKPILAQPFTCEVEHKLGVVCVGGGQIKCRVSLDRGGYVPGENI 190

  Fly   196 PVEVMVSNDSGVAVEDITVKLTMVVIYYSQPPSADTNKDRFEMVLKTGGGVSTKCRQQFTFDLKV 260
            .|...:||.|.|:::.....||..:.|.::.....|.|.  |:.:...|.:....:.::..:|.|
  Fly   191 LVTAFISNYSNVSIKRTKASLTETIEYLARGKVVQTEKR--ELAVLVRGKIRPGAKDEWHNELYV 253

  Fly   261 PPTPPTCFNLCSIIQIGYQVEAEARVKGCHGGQSLHMPITIGSVPLTKQLQK-EPRTWGE-VLPP 323
            ||.|||..:.|.:|:|.|.|......|.......|.:||.:.:.|....... ...||.| ||.|
  Fly   254 PPLPPTNLHGCHLIKISYDVFFVIEPKSMEKEIKLQLPIVLATYPFRHSGDAVNANTWPESVLKP 318

  Fly   324  323
              Fly   319  318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18746NP_652649.1 Arrestin_N 4..150 CDD:425619 33/148 (22%)
Arrestin_C 174..306 CDD:214976 34/131 (26%)
Vdup1NP_612004.2 Arrestin_N 8..145 CDD:451447 33/148 (22%)
Arrestin_C 171..299 CDD:214976 34/129 (26%)

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