DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18746 and arrd-16

DIOPT Version :10

Sequence 1:NP_652649.1 Gene:CG18746 / 59142 FlyBaseID:FBgn0042103 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_499629.2 Gene:arrd-16 / 190071 WormBaseID:WBGene00013043 Length:399 Species:Caenorhabditis elegans


Alignment Length:453 Identity:114/453 - (25%)
Similarity:172/453 - (37%) Gaps:122/453 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NNSQGIFYAGQLISGQVVIKTEKEKSVKAVILNIKGYAETHWADTEHDPDDQSNGESFNGHVDYL 74
            :|.:.|:..|..|.|.|.....:...|||:.::.:|.|.|.|..:|  ....|:|.|  ..|.|.
 Worm    10 SNCEQIYEPGGTIEGYVTFDLRESVKVKAIRISAEGLATTKWLLSE--SSKSSHGRS--REVSYS 70

  Fly    75 ATRAYL------------HGSSSSIEVLIEPGTSSYRFACQLPITCPSSFEGTLGRIRYLVNVRF 127
            |...||            |..||     :.||...|.|..|:||..|.||||..|.|||.:....
 Worm    71 AKVTYLDEEQMVWKPSEGHSKSS-----VFPGIHVYPFKFQIPIGVPPSFEGDHGNIRYHMKATV 130

  Fly   128 VRPWKFDLNFNRCFTVIKVMDLNSESLMLRVPSQVESQRT-FCCFPCRSSPLSMRLSVPQSGFVP 191
            .||||.:.:..|..|::...|||.|.|.....|..:|::. |..|  |...:::::.:|:.|:||
 Worm   131 ERPWKTNRSVTRYLTILPPKDLN
KEVLASEETSSWKSKKVGFFLF--RYGKVNLQIRIPKKGYVP 193

  Fly   192 GQIVPVEVMVSNDSG---VAVEDITVKLTMVVIY---YSQP-----PSADTNKDRF--------- 236
            |:.:.:|..:.|.|.   :..|...::....:.|   .|.|     .|:.:..||:         
 Worm   194 GETISIETNIDNMSSRPILKTECYLIQQCRFLAYRYGISGPTDGRRASSLSENDRYLSRKRDEIK 258

  Fly   237 ------EMVLKTGGGVSTKCRQQFTFDLKVPPTPPTCFNLCSIIQIGYQVEAEARVKGCHGGQSL 295
                  ||.::.......|.|      ||:|.|.|| |: .::|.:.|.|..:..|| |....::
 Worm   259 IVSVIHEMHIEPRTEHKAKMR------LKIPCTCPT-FD-STLIHVEYFVVVKLHVK-CRMRNTV 314

  Fly   296 --HMPITIGSVPLTKQLQKEPRTWGEVLPPQQLDAKALILIGSEQNGEALGSPNPWAADPSIAPP 358
              ..||.|||.||..: ..:|||                                         |
 Worm   315 KAECPIIIGSKPLADE-HVDPRT-----------------------------------------P 337

  Fly   359 SYAEAKHISPDPHKFSKSKKKSQKRGVKGSQERKAETIVFSPLYAVFDLSNQVDEMTLRANEP 421
            :|.|....|...|           |.:....|:.....|:.|.|.    .::.||    |:||
 Worm   338 TYQEVATFSALTH-----------RSMMSVDEKLTPKYVYYPKYG----KSRDDE----ADEP 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18746NP_652649.1 Arrestin_N 4..150 CDD:425619 48/151 (32%)
Arrestin_C 174..306 CDD:214976 38/159 (24%)
arrd-16NP_499629.2 Arrestin_N 9..153 CDD:425619 48/151 (32%)
Arrestin_C 178..327 CDD:214976 37/157 (24%)

Return to query results.
Submit another query.