DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18746 and arrd-23

DIOPT Version :10

Sequence 1:NP_652649.1 Gene:CG18746 / 59142 FlyBaseID:FBgn0042103 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_508830.3 Gene:arrd-23 / 188239 WormBaseID:WBGene00020323 Length:444 Species:Caenorhabditis elegans


Alignment Length:481 Identity:98/481 - (20%)
Similarity:163/481 - (33%) Gaps:134/481 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CEIEFCNNSQGIFYAGQLISGQVVIKTEKEKSVKAVILNI--KGYAETHWADTEHDPDDQSNGES 66
            |.:|. :.....:..|..|.|::.:|. .|.|::...|.|  .||.:.                :
 Worm    16 CMLEL-SRKDACYNWGDTIQGKLNLKI-SEGSIEITSLRILFHGYGKI----------------N 62

  Fly    67 FNGHVDYL--ATRAYLHGSSSSIEVLIEPGTSSYRFACQ--LPITCPSSFEGTLGRIRYLVN--- 124
            ..|..|.|  ....|:...|::|...|......|....:  ||...|:|.....|.|:|::.   
 Worm    63 CKGKKDELLQENMTYMKKFSNAISQPIVVSQQEYSIPIEETLPDQLPTSVYSPKGHIQYVIQCTL 127

  Fly   125 -----------VRFVRPWKFDLNFNRCFTVIKVMDLNSESLMLRVPSQVESQRTFCCFPCRSSPL 178
                       |:.||.          .|||:.:|||..|.....|.....||.|..|.|....:
 Worm   128 EYKTAAGTPSIVKAVRG----------ITVIESLDLNKISKTWFEPKTEFEQRKFGWFACTGGHI 182

  Fly   179 SMRLSVPQSGFVPGQIVPVEVMVSNDSGVAVEDITVKL--------------------------T 217
            .:.|:..:|.||.|:.:|....:.|.|...:|.::|.|                          .
 Worm   183 RLHLTFERSAFVCGEAIPFIGKIENKSDRRIEKVSVCLMRNTRFGNDVEDDVENATVDHHLIQED 247

  Fly   218 MVVIYYSQ---------------PPSA-----------DTNKDRFEMVLKTGGG----VSTKCRQ 252
            ::.:|..:               .||.           |.||  |::..|:..|    .|.|.||
 Worm   248 LMAMYIEEGCVNKIDKKVHIPCTAPSTPLPILFRSGQLDGNK--FQLRRKSQLGRLSLTSQKSRQ 310

  Fly   253 QFTFDLKVPPTPPTCFNLCSIIQIGYQVEAEARVKGCHGGQSLHMPITIGSVPLTKQLQKEPRTW 317
            ..:          :..|:..|:.|.|....:.|..|. ....|.:|:.||:||....:..     
 Worm   311 SIS----------STSNMQRILAITYAFLIKVRSNGM-DVIDLSVPVVIGTVPYIDHVNS----- 359

  Fly   318 GEVLPPQQLDAKALILIGSEQNGEALGSPNPWAADPSIAPPSYAEAKHISPDPH--KFSKSKKKS 380
            |:  |...||...:.|...::       |.|...:...:..:.|:.:|::..|.  ....|.|:|
 Worm   360 GD--PSDPLDRPVINLCRQDK-------PIPLLDEKERSLCNKAQLQHVNKYPFFATLPTSSKQS 415

  Fly   381 QKRGVKGSQERKAETIVFSPLYAVFD 406
            :|..|. :|..|.|..:.:.:.:..|
 Worm   416 KKLCVI-AQNIKVENKIMNTIKSAVD 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18746NP_652649.1 Arrestin_N 4..150 CDD:425619 34/165 (21%)
Arrestin_C 174..306 CDD:214976 35/187 (19%)
arrd-23NP_508830.3 Arrestin_C 180..353 CDD:214976 35/185 (19%)

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