DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18746 and arrd-19

DIOPT Version :10

Sequence 1:NP_652649.1 Gene:CG18746 / 59142 FlyBaseID:FBgn0042103 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_503917.1 Gene:arrd-19 / 178764 WormBaseID:WBGene00018061 Length:471 Species:Caenorhabditis elegans


Alignment Length:461 Identity:129/461 - (27%)
Similarity:193/461 - (41%) Gaps:77/461 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NNSQGIFYAGQLISGQVVIKTEKEK-SVKAVILNIKGYAETHWADTEHDPDDQSNGE-------- 65
            |....:|:.|:.|||:||:.|.||| ..:||.:.|.|.|.|.|.|||......:.|:        
 Worm    11 NQPDEVFHPGKPISGRVVLSTTKEKYKARAVNIKILGLAHTSWTDTERVRKVNAEGKETYETKIV 75

  Fly    66 SFNGHVDYLATRAYLHGSSSSIEVLIEPGTSSYRFACQLPITCPSSFEGTLGRIRYLVNVRFVRP 130
            :::.:|:||.....|..||.....| ..|..::.|:..|||..|.||||..|.:||.|.....||
 Worm    76 NYSANVNYLDYSLLLWASSDGSNEL-AAGEYAWPFSYTLPINVPPSFEGKYGYLRYSVTAEIDRP 139

  Fly   131 WKFDLNFNRCFTVIKVMDLN-SESLMLRVPSQVESQRTFCCFPCRSSPLSMRLSVPQSGFVPGQI 194
            |:.|.:..||.||..::||| ....:.::..|.......|||  ....|.:|:::|::|||||:.
 Worm   140 WRVDKDKKRCITVSPLIDLN
VIPHALTQINDQASENLGCCCF--TKGYLELRVNIPKTGFVPGET 202

  Fly   195 VPVEVMVSNDSGVAVEDITVKLTM-----------VVIY---YSQPPSA---DTNKDRFEMVLKT 242
            ||:.:.:.|.|.|.|..:..|:..           .|.|   |....|.   :|..|. ..|:|.
 Worm   203 VPMNIHILNHSSVPVTKVKAKIIQQCKFIAYRNGTTVTYDGGYETSTSGMLQETQHDT-RTVVKQ 266

  Fly   243 G--GGVSTKCRQQFTFDLKVPPTPPTCFNLCSIIQIGYQVEAEARVK-GCHGGQSLHMPITIGSV 304
            |  ..|:.:...:|..:|::|...||......:|.:.|.|:...... .|.|.....|.|.||:|
 Worm   267 GLEMKVAPRNEHKFAMELRLPSVTPTINQFSPVITVEYIVQFHVETSTTCGGNVDCEMSILIGTV 331

  Fly   305 PLTKQL-----QKEPRTWGEVLPPQQLD-----------AKA----------LILIGSEQNGEA- 342
            |::|.|     .::|.     |||.|..           |.|          |.:.....||.. 
 Worm   332 PISKYLPPAYYPQDPN-----LPPSQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDGTDNGAGD 391

  Fly   343 ----LGSPNPWAADPSIAPPSYAEAKH---ISPDPHKFSKSKKKSQKRGVKGSQERKAETIVFSP 400
                :|.|.|  :|.....||..|.|.   :.|.....|..:......|.:.:.:..|:.  |:|
 Worm   392 TPYPVGPPYP--SDVPAPYPSGDEPKDGTVVVPSAPPLSYEESMYGTEGTELNTDENAQP--FAP 452

  Fly   401 LYAVFD 406
            .|.||:
 Worm   453 KYPVFN 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18746NP_652649.1 Arrestin_N 4..150 CDD:425619 53/148 (36%)
Arrestin_C 174..306 CDD:214976 40/151 (26%)
arrd-19NP_503917.1 Arrestin_N 6..159 CDD:425619 53/148 (36%)
Arrestin_C 182..332 CDD:214976 39/150 (26%)
PHA03247 <338..470 CDD:223021 27/130 (21%)

Return to query results.
Submit another query.