DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18746 and arrd-18

DIOPT Version :9

Sequence 1:NP_652649.1 Gene:CG18746 / 59142 FlyBaseID:FBgn0042103 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_503916.1 Gene:arrd-18 / 178763 WormBaseID:WBGene00018060 Length:450 Species:Caenorhabditis elegans


Alignment Length:469 Identity:121/469 - (25%)
Similarity:185/469 - (39%) Gaps:125/469 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IFYAGQLISGQVVIKTEKEKSVKAVILNIKGYAETHWADTEHDPDDQSNGESFNG--------HV 71
            :|:.||.|||:||:.|::....:||.:.|.|.|.|.|.:.|       |...|||        .:
 Worm    17 VFFPGQPISGRVVLTTKENYKARAVNIKILGLAHTSWKNYE-------NACKFNGSSISIRPRSI 74

  Fly    72 DYLATRAYL----------HGSSSSIEVLIEPGTSSYRFACQLPITCPSSFEGTLGRIRYLVNVR 126
            .|.|...||          .|.:.     :..|...:.|:..||.:.|.||||..|.:||.|.|.
 Worm    75 HYSANVNYLDYTQLLWTCEDGKNE-----LAAGEYVWPFSYTLPTSIPPSFEGKYGYVRYTVKVE 134

  Fly   127 FVRPWKFDLNFNRCFTVIKVMDLN--SESLMLRVPSQVESQRTFCCFPCRSSPLSMRLSVPQSGF 189
            ..|||:.|.....|.||..::|||  ..|| .::..|.....:||||  :...|.|.|::|::||
 Worm   135 VDRPWRKDKAKKMCITVSPLLDLN
VIPHSL-TQINHQASENISFCCF--QGGILEMSLNIPKTGF 196

  Fly   190 VPGQIVPVEVMVSNDSGVAVEDITVKLTMVVIYYSQPPSADTN-----------KDRFEMVLKTG 243
            |||:.||:.|.:.|.|..:|.:|..::.....:......|..|           .|:.:.:....
 Worm   197 VPGETVPLNVHLINHSSTSVNNIKAQMLQQCKFTGYKSGATYNYGGDFERNEKMSDKIQRIKFDT 261

  Fly   244 GGVSTKCRQ---------QFTFDLKVPPTPPTCFNLCSIIQIGY--QVEAEARVKGCHGGQSLHM 297
            ..|...|::         :|..:|::|...||......:|.:.|  ||..:..|: |...     
 Worm   262 KKVVKVCQKLEVPAKNEHKFVLELRIPSVTPTINQFSPVITVEYILQVNVDGLVR-CESS----- 320

  Fly   298 PITIGSVPLTKQL-----QKEPRTWGEVLPPQQ----------------------LDAKALILIG 335
             |.:||||:.:.|     |::|.     |||.:                      .||...:.:.
 Worm   321 -ILLGSVPIHQYLPPAYYQQDPN-----LPPSKPTPIGAPPPGYGPLPTDDSEKGADAPYPLDLY 379

  Fly   336 SEQNGEALGSPNPWAADPS--------IAPPSYAEAKHISPDPHKFSKSKKKSQKRGVKGSQERK 392
            ...|.|.:.:||   .||:        .|||||.|:.:                  |..|:....
 Worm   380 PNVNDEKVPNPN---EDPTKDGTAVLPSAPPSYQESMY------------------GKAGTVLDA 423

  Fly   393 AETIVFSPLYAVFD 406
            .|...:.|.|.||:
 Worm   424 KENGPYVPKYPVFN 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18746NP_652649.1 Arrestin_N 4..150 CDD:278754 48/152 (32%)
Arrestin_C 174..306 CDD:214976 36/153 (24%)
arrd-18NP_503916.1 Arrestin_N 9..158 CDD:334019 48/152 (32%)
Arrestin_C 183..327 CDD:214976 35/150 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 95 1.000 Domainoid score I4648
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H119234
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46400
OrthoDB 1 1.010 - - D311636at33208
OrthoFinder 1 1.000 - - FOG0000089
OrthoInspector 1 1.000 - - otm14113
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11188
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X122
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.930

Return to query results.
Submit another query.