DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18746 and arrd-17

DIOPT Version :9

Sequence 1:NP_652649.1 Gene:CG18746 / 59142 FlyBaseID:FBgn0042103 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_499816.2 Gene:arrd-17 / 176799 WormBaseID:WBGene00011732 Length:426 Species:Caenorhabditis elegans


Alignment Length:432 Identity:114/432 - (26%)
Similarity:190/432 - (43%) Gaps:83/432 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EIEFCNNSQGIFYAGQLISGQVVIKTEKEKSVKAVILNIKGYAETHWADTEHDPDDQSNG----- 64
            ||.| ||.:..::|||.|||:|:|:.::.|.|..::|.:||.|.|:|  |:|....:.:.     
 Worm     8 EILF-NNPEQAYFAGQEISGKVIIENKEPKKVNEILLELKGRARTYW--TKHSGKSRKHCSHSEP 69

  Fly    65 ---ESFNGHVDYLATRAYLH-----GSSSSIEVLIEPGTSSYRFACQLPITCPSSFEGTLGRIRY 121
               |.||        ..|.|     ......|.::..|.....|:..||.:.||||||..|.|||
 Worm    70 YFLEQFN--------PGYTHKFTVVKDGKEKERILPAGIHQVPFSYTLPKSLPSSFEGEFGHIRY 126

  Fly   122 LVNVRFVRPWKFDLNFNRCFTVIKVMDLNSESLMLRVPSQVESQR--TFCCFPCRSSPLSMRLSV 184
            .......|||.||:...:.|||:.:.|:||:..:....:.|||..  ||||....|....:|:| 
 Worm   127 TCKAICERPWDFDIVSRKAFTVVGIEDIN
SDPKLNEPATCVESNHAVTFCCRSAGSVTGEIRIS- 190

  Fly   185 PQSGFVPGQIVPVEVMVSNDSGVAVEDITVKLTMVVIYYSQPPSADTN-KDRFEMVLK-----TG 243
             :.|:.||:.:.|...|.|.|. ......::......|.::..:...: |:...::.|     ..
 Worm   191 -KCGYTPGEKIDVSFKVINLSS-KTRTTALRFVQQTTYKAKTFAGHEHIKNVVRVISKIDKGEVP 253

  Fly   244 GGVSTKCRQQFTFDLKVPPTPPTCFNLCSIIQIGYQVEAEARVKGCHGGQSLHM--PITIGSVPL 306
            ||.:|:.:::   .:.:|..||. ...|.|:.:.|.||.|..       |:|.:  ||.|||:|.
 Worm   254 GGSTTEWQEE---SITIPSLPPK-LGKCKILSVTYSVELEVE-------QTLTVPCPIVIGSIPQ 307

  Fly   307 TKQL-----QKEPRTWGEVLP-------PQQLDAKALILIG-SEQNG---EALGS---------- 345
            ..||     |.........||       |.:.|:::.:.:. ::::|   |.||:          
 Worm   308 LSQLLIHSKQSVQSAGNGSLPKSSIKDSPPKWDSESCVQVTITDESGQLVEELGNEMEALLSARK 372

  Fly   346 ----PNPWAAD--PSIAPPSYAEAKHISPDPHKFSKSKKKSQ 381
                |:...::  |::..|.|.|:...:.|   .|:.|:::|
 Worm   373 RVRMPSSILSELYPTMPSPYYKESFFGASD---ISEEKEQAQ 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18746NP_652649.1 Arrestin_N 4..150 CDD:278754 52/157 (33%)
Arrestin_C 174..306 CDD:214976 32/139 (23%)
arrd-17NP_499816.2 Arrestin_N 7..155 CDD:278754 52/157 (33%)
Arrestin_C 181..304 CDD:280848 30/136 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I2737
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311636at33208
OrthoFinder 1 1.000 - - FOG0000089
OrthoInspector 1 1.000 - - otm14113
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11188
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X122
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.970

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