DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18745 and aly2

DIOPT Version :10

Sequence 1:NP_652648.1 Gene:CG18745 / 59141 FlyBaseID:FBgn0042102 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_596223.1 Gene:aly2 / 2540410 PomBaseID:SPBC2D10.04 Length:658 Species:Schizosaccharomyces pombe


Alignment Length:504 Identity:98/504 - (19%)
Similarity:163/504 - (32%) Gaps:189/504 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CEIDFDNNPHGTYFGGEVLTGRVTLKLDKMKLVKAITLNITGYAETRWIERVTTNRRRRRRTFCG 69
            |:|:   ||       .:|.|.:.|::.|...::.|:|:.||.:.|.|.|.:...         |
pombe   168 CQIE---NP-------ALLRGALVLRVAKPANIRGISLSFTGRSRTEWPEGIPVK---------G 213

  Fly    70 REDY----IASKTF---------------------LVGSNL----SSQVSIEA------GIHTYN 99
            .:.|    |.|..:                     |||..|    |:..|:..      |.:|||
pombe   214 HDTYEDKVIISHNWKFYEPTMKDADAPQHGADVARLVGEQLPLPSSAAASLRGYSVFAPGEYTYN 278

  Fly   100 FVCLIPTECPSSFEGSHGRVRYMATVTLVRPWKFDQSYTRCFTVLKVMDLNFDSP--LLRVPAHS 162
            |...||...|.|.|...|.|||....|:.|           |...| .:||..:|  |:|.|:.:
pombe   279 FDLAIPNCFPESVEAKMGWVRYFLEATVER-----------FGTFK-SNLNGRTPVQLVRTPSPA 331

  Fly   163 ETSKTYCC-----WPCRSDPLALQLTVPQTGFVPGQNVPLSVLVTNDSHIPVEQLLISFVMLVTY 222
            ..|.:...     |   .:.|..:|.|....|..|:.||::........:.:.:|.||.|....|
pombe   332 SLSSSELINISRDW---DERLHYELQVSGKSFRLGEVVPITFRFLLLDKVRLYKLSISVVESSEY 393

  Fly   223 -------HSKPP---------SMPNTTSERLVVNTFKGDAVQRNCKKLFSYEIRVPATPPTCF-- 269
                   |...|         |..:..::.|.....:||.:.   ..:|::.:.:    |||.  
pombe   394 WCRSRKFHRVDPKRRVLLAERSAKHQNTDNLFETPDEGDGLS---SAVFNFNVAL----PTCLVK 451

  Fly   270 ------------------NLCGIIQIAYQ--------------VEVEARVKGCH----------- 291
                              .|..::.::.:              :|...|:..|.           
pombe   452 ERDRLTFDTTYKYIKVRHRLKALLVLSIENTENPEKRKYFEINIETPVRILSCRCVKDSTLLPPY 516

  Fly   292 -------NNEVVTIPLTIGSVPLAQHV-PIQPRGFVPQLNVNELAVEEVATAPNSSSPWSVDAS- 347
                   |..::..|..:.:.    || |.:...|..|   :.||    ::||::..|.:...| 
pombe   517 ESSSQGDNQVLLPCPCRLATT----HVEPTEVTAFTTQ---SVLA----SSAPSAGRPAAAQISR 570

  Fly   348 -------------------------IPPPNYQEAVHMRSTAATRSDDLD 371
                                     .|||||.|...:.|:.:.:..:.|
pombe   571 PAQLFRIPSTNPPPFDGDVCPPACNTPPPNYDELFDVLSSISIQDCETD 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18745NP_652648.1 Arrestin_N 5..150 CDD:425619 43/179 (24%)
Arrestin_C 174..307 CDD:214976 28/200 (14%)
TMEM52 <332..377 CDD:464418 12/66 (18%)
aly2NP_596223.1 Arrestin_N 178..326 CDD:451447 42/168 (25%)
Arrestin_C 345..506 CDD:214976 27/170 (16%)

Return to query results.
Submit another query.