DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18745 and arrdc1a

DIOPT Version :10

Sequence 1:NP_652648.1 Gene:CG18745 / 59141 FlyBaseID:FBgn0042102 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_068077148.2 Gene:arrdc1a / 100006005 ZFINID:ZDB-GENE-030925-15 Length:448 Species:Danio rerio


Alignment Length:456 Identity:111/456 - (24%)
Similarity:193/456 - (42%) Gaps:77/456 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EIDFDNNPHGTYFGGEVLTGRVTLKLDKMKLVKAITLNITGYA-------ETRWIERVTTNRRRR 63
            ||.|||| ...|..||.|||.:.:.:.:....|||.:|..|:.       :|.|.:         
Zfish     8 EISFDNN-KTVYSPGESLTGTLKISIAQSIQCKAIKVNCQGFCGVTSKSNDTDWTD--------- 62

  Fly    64 RRTFCGREDYIASKTFLVGSNLSSQVSIEAGIHTYNFVCLIPTECPSSFEGSHGRVRYMATVTLV 128
                  .|.|.:|..     :::.:.:::.|.|::.|..|:|...|:||.|.:|::.|.....:.
Zfish    63 ------EEQYFSSSV-----SIADKGTLKEGEHSFPFKFLLPAAAPTSFVGPYGQIMYRVRAFID 116

  Fly   129 RPWKFDQSY--TRCFTVLKVMDLNFDSPLLRVPAHSETSKTYCCWPCRSDPLALQLTVPQTGFVP 191
            .| :|.:.|  .:.|::...::|| :.|.:|.|:.|..:|.:.....::..:.|.......|::.
Zfish   117 TP-RFAKDYKIEKPFSMTNTLNLN-EVPGIREPSSSSVTKNFSYMLVKNGTVVLNAKTDMRGYIA 179

  Fly   192 GQNVPLSVLVTNDSHIPVEQLLISFVMLVTYHSKPPSMPNTTSERLVVNTFKGDAVQRNCKKLFS 256
            ||.:.:|..:.|.|......::.|.:..|||::|     ..|.:...|...:|..|:...|..::
Zfish   180 GQIIKVSAGIENKSDKTTGHVVASLMQKVTYNTK-----KQTYDLRSVAEVEGPGVKGGNKSEWN 239

  Fly   257 YEIRVPATPPTCFNLCGIIQIAYQVEVEARVKGCHNNEVVTIPLTIGSVPLAQHVPIQPRGFVPQ 321
            .:|.|||.|.:..:...:|||.|.::|..:    :....:|:|:.||||.|....|...:...| 
Zfish   240 QQIIVPALPHSSLSDGNLIQICYYIQVYLK----YPEVALTLPICIGSVALDPSQPSHSQTVAP- 299

  Fly   322 LNVNELAVEEVATAPNSSSPWSVDASIPP---PNYQEAVHMRSTAATRSDDLDDPEPVPPNTLSL 383
                 :....:..||:.|:|.|..:::||   |........|||.|:.|....|..|..|:..:.
Zfish   300 -----MPAPRITPAPSPSAPESEASNLPPRPAPKPAPKPRPRSTHASPSAPPVDLYPQLPSVSNY 359

  Fly   384 DG----------GAYKPLYP-VFDI------------PSPSAPP----PTDYTQNYMAERAFVNP 421
            :|          |:..|:.| .|..            ..|||||    .:...:|.|...|.|.|
Zfish   360 NGEMLKSPHQEPGSQGPVSPNAFSYAPGLSFRQRQSSSGPSAPPLSLSSSSQDRNQMPSSASVPP 424

  Fly   422 A 422
            :
Zfish   425 S 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18745NP_652648.1 Arrestin_N 5..150 CDD:425619 37/152 (24%)
Arrestin_C 174..307 CDD:214976 33/132 (25%)
TMEM52 <332..377 CDD:464418 15/47 (32%)
arrdc1aXP_068077148.2 None

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