DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18744 and Vdup1

DIOPT Version :9

Sequence 1:NP_652647.2 Gene:CG18744 / 59140 FlyBaseID:FBgn0042101 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001163303.1 Gene:Vdup1 / 38023 FlyBaseID:FBgn0035103 Length:342 Species:Drosophila melanogaster


Alignment Length:337 Identity:61/337 - (18%)
Similarity:128/337 - (37%) Gaps:80/337 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IQLDNPRGVYRAGDTVNGHVYLTLSERALIKAICLEANGYASTAWQQPQKHKNQKKNEQPVVVQS 71
            |..||...:|..|..::|.|.:.|.:......:.....|.......:.|:....|:|.       
  Fly    10 IIFDNTSLLYFPGQFLSGRVLIELQDETPALGLHFHVVGEGVVRNGRRQERTYDKENY------- 67

  Fly    72 LDFDYRVDYFAKIDYFVGSEAAQPQIMEAGTYNYGFHVKLPKNCPGNFEGGHGHIRYTLQVLIHS 136
              .|:|:.....:|      ...|.|:..|.:::.|.:.||...|..|.|.:|.|::..:..:..
  Fly    68 --IDFRMRLLGDVD------QGGPAILSPGIHSFPFKLGLPLGLPSTFLGRYGWIQFYCKAALRE 124

  Fly   137 SADRPLEVLHVRQLQIF----P-----QNSLSQETRSCEIQIYEQTPRLRFWMKPLH-------- 184
            :..    ::| :..|:|    |     :..:..:..:||::               |        
  Fly   125 NNG----IIH-KNHQVFIVMNPIDLN
LEKPILAQPFTCEVE---------------HKLGVVCVG 169

  Fly   185 -----LQLQIPRQGYSPGAGISVHLKLHNPEKLTLREAVYSLVQISTYVAHLKNKPKRLETKVER 244
                 .::.:.|.||.||..|.|...:.|...::::....||.:...|:|..|            
  Fly   170 GGQIKCRVSLDRGGYVPGENILVTAFISNYSNVSIKRTKASLTETIEYLARGK------------ 222

  Fly   245 QTVLSSRHELHNLPRGELQN------FQHLHMLQVPQTAATLTVAGCACLQLNYEVEVLVTTQQE 303
             .|.:.:.||..|.||:::.      ...|::..:|.|    .:.||..::::|:|..::..:..
  Fly   223 -VVQTEKRELAVLVRGKIRPGAKDEWHNELYVPPLPPT----NLHGCHLIKISYDVFFVIEPKSM 282

  Fly   304 KRLIAARMPVII 315
            ::.|..::|:::
  Fly   283 EKEIKLQLPIVL 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18744NP_652647.2 Arrestin_N 5..141 CDD:304627 26/133 (20%)
Arrestin_C 179..322 CDD:214976 29/156 (19%)
Vdup1NP_001163303.1 Arrestin_N 8..145 CDD:304627 30/154 (19%)
Arrestin_C 171..299 CDD:214976 28/141 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3780
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 43 1.000 Inparanoid score I2088
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D137165at6656
OrthoFinder 1 1.000 - - FOG0000089
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11188
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.970

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