DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18744 and arrd-16

DIOPT Version :10

Sequence 1:NP_652647.2 Gene:CG18744 / 59140 FlyBaseID:FBgn0042101 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_499629.2 Gene:arrd-16 / 190071 WormBaseID:WBGene00013043 Length:399 Species:Caenorhabditis elegans


Alignment Length:429 Identity:102/429 - (23%)
Similarity:174/429 - (40%) Gaps:94/429 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHRCEIQLDNPRGVYRAGDTVNGHVYLTLSERALIKAICLEANGYASTAWQQPQKHKNQKKNEQ 65
            |.....:.|.|...:|..|.|:.|:|...|.|...:|||.:.|.|.|:|.|...:..|:.....:
 Worm     1 MPFHLALGLSNCEQIYEPGGTIEGYVTFDLRESVKVKAIRISAEGLATTKWLLSESSKSSHGRSR 65

  Fly    66 PVVVQSLDFDYRVDYFAKIDY-------FVGSEAAQPQIMEAGTYNYGFHVKLPKNCPGNFEGGH 123
                       .|.|.||:.|       :..||......:..|.:.|.|..::|...|.:|||.|
 Worm    66 -----------EVSYSAKVTYLDEEQMVWKPSEGHSKSSVFPGIHVYPFKFQIPIGVPPSFEGDH 119

  Fly   124 GHIRYTLQVLIHSSADRPLEVLH--VRQLQIFPQNSLSQETRSCEIQIYEQTPRLRFWM---KPL 183
            |:|||.::    ::.:||.:...  .|.|.|.|...|::|..:.|.....::.::.|::   ..:
 Worm   120 GNIRYHMK----ATVERPWKTNRSVTRYLTILPPKDLNKEVLASEETSSWKSKKVGFFLFRYGKV 180

  Fly   184 HLQLQIPRQGYSPGAGISVHLKLHNPEKLTLREAVYSLVQISTYVAH---------------LKN 233
            :||::||::||.||..||:...:.|.....:.:....|:|...::|:               |..
 Worm   181 NLQIRIPKKGYVPGETISIETNIDNMSSRPILKTECYLIQQCRFLAYRYGISGPTDGRRASSLSE 245

  Fly   234 KPKRLETKVERQTVLSSRHELHNLPRGELQNFQHLH----MLQVPQTAATLTVAGCACLQLNYEV 294
            ..:.|..|.:...::|..||:|..||.|       |    .|::|.|..|.   ....:.:.|.|
 Worm   246 NDRYLSRKRDEIKIVSVIHEMHIEPRTE-------HKAKMRLKIPCTCPTF---DSTLIHVEYFV 300

  Fly   295 EVLVTTQ-QEKRLIAARMPVIIGNVTPPCPGKLLMQEPIDGTAPEPTPPVETASTLIPNFSISTT 358
            .|.:..: :.:..:.|..|:|||:       |.|..|.:|...|                     
 Worm   301 VVKLHVKCRMRNTVKAECPIIIGS-------KPLADEHVDPRTP--------------------- 337

  Fly   359 SLASNFREAEFMVATNLNKTNKHYLSGEQLDFRPRYVYY 397
                .::|    |||....|::..:|.:: ...|:||||
 Worm   338 ----TYQE----VATFSALTHRSMMSVDE-KLTPKYVYY 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18744NP_652647.2 Arrestin_N 5..141 CDD:451447 38/142 (27%)
Arrestin_C 179..318 CDD:460676 37/161 (23%)
arrd-16NP_499629.2 Arrestin_N 9..153 CDD:425619 44/158 (28%)
Arrestin_C 178..327 CDD:214976 38/165 (23%)

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