DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18744 and arrd-1

DIOPT Version :9

Sequence 1:NP_652647.2 Gene:CG18744 / 59140 FlyBaseID:FBgn0042101 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_493774.2 Gene:arrd-1 / 173454 WormBaseID:WBGene00020205 Length:291 Species:Caenorhabditis elegans


Alignment Length:361 Identity:75/361 - (20%)
Similarity:125/361 - (34%) Gaps:98/361 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EIQLDNPRGVYRAGDTVNGHVYLTLS---ERAL-IKAICLEANGYASTAWQQPQKHK-----NQK 61
            :|..|.|  ||..||.:.    ||:|   :|.| .:::.....|:.:.......|:.     ...
 Worm     9 DISFDKP--VYYPGDNMK----LTVSVDTKRPLNARSVMFRCRGFRNRTVSFLNKYGIAWICKDG 67

  Fly    62 KNEQPVVVQSLDFDYRVDYFAKIDYFVGSEAAQPQIMEAGTYNYGFHVKLPKNCPGNFEGGHGHI 126
            |||.||                                 |.....|..:|.|:||..::  .|.|
 Worm    68 KNELPV---------------------------------GRLEQKFQFELGKDCPPTYK--DGKI 97

  Fly   127 RYTLQVLIHSSADRPL----EVLHVRQLQIFPQNSLSQETRSCEIQIYEQTPRL--RFWMKPLHL 185
            .|.:::.|.....|||    |...|.:|         .:.:..::..|..:||.  .|.......
 Worm    98 IYKVRLEIDQPWSRPLFIEKEFKMV
HKL---------ADQKMSQVMTYTSSPRFDALFSNGQPTF 153

  Fly   186 QLQIPRQGYSPGAGISVHLKLHNPEKLTLREAVYSLVQISTY-VAHLKNKPKRLETKVERQTVLS 249
            ::.:|:....||......|::.|....|::: :|:.::...: :.|:....|             
 Worm   154 KVTMPKFTLYPGETTEFKLEVENHSSSTVKK-IYAELEAEPFPLYHIYGNTK------------- 204

  Fly   250 SRHELHNLPRG-ELQNFQHLHMLQVPQTAAT-LTVAGCAC-LQLNYEVEV-LVTTQQEKRLIAAR 310
            ::.::|.|... ..|.|      .:|.|..| ||.:...| ..|.|.::. |||........|..
 Worm   205 AKGKMHVLVAPYSTQKF------TIPFTIPTDLTASFHTCGSSLKYTMKFGLVTDSWLTTDPALA 263

  Fly   311 MPVIIGNVTPPCPGKLLMQEPIDGTAPEPTPPVETA 346
            :.|.|        |:|..:|..|.....|.||..||
 Worm   264 LVVSI--------GELESEEKKDEALKTPPPPPYTA 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18744NP_652647.2 Arrestin_N 5..141 CDD:304627 29/143 (20%)
Arrestin_C 179..322 CDD:214976 27/147 (18%)
arrd-1NP_493774.2 Arrestin_N 8..122 CDD:389964 33/153 (22%)
Arrestin_C 147..269 CDD:214976 27/149 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311636at33208
OrthoFinder 1 1.000 - - FOG0000089
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11188
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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