DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18744 and arrdc1a

DIOPT Version :10

Sequence 1:NP_652647.2 Gene:CG18744 / 59140 FlyBaseID:FBgn0042101 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_068077148.2 Gene:arrdc1a / 100006005 ZFINID:ZDB-GENE-030925-15 Length:448 Species:Danio rerio


Alignment Length:363 Identity:76/363 - (20%)
Similarity:136/363 - (37%) Gaps:64/363 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EIQLDNPRGVYRAGDTVNGHVYLTLSERALIKAICLEANGYASTAWQQPQKHKNQKKNEQPVVVQ 70
            ||..||.:.||..|:::.|.:.:::::....|||.:...|:...         ..|.|:      
Zfish     8 EISFDNNKTVYSPGESLTGTLKISIAQSIQCKAIKVNCQGFCGV---------TSKSND------ 57

  Fly    71 SLDFDYRVDYFAKIDYFVGS-EAAQPQIMEAGTYNYGFHVKLPKNCPGNFEGGHGHIRYTLQVLI 134
                   .|:..:..||..| ..|....::.|.:::.|...||...|.:|.|.:|.|.|.::..|
Zfish    58 -------TDWTDEEQYFSSSVSIADKGTLKEGEHSFPFKFLLPAAAPTSFVGPYGQIMYRVRAFI 115

  Fly   135 HS-------SADRPLEVLHVRQLQIFP---QNSLSQETRSCEIQIYEQTPRLRFWMKPLHLQLQI 189
            .:       ..::|..:.:...|...|   :.|.|..|::....:.:.        ..:.|..:.
Zfish   116 DTPRFAKDYKIEKPFSMTNTLNLNEVPGIREPSSSSVTKNFSYMLVKN--------GTVVLNAKT 172

  Fly   190 PRQGYSPGAGISVHLKLHNPEKLTLREAVYSLVQISTYVAHLKNKPKRLETKVERQTVLSSRHEL 254
            ..:||..|..|.|...:.|....|....|.||:|..||....:....|...:||...|.......
Zfish   173 DMRGYIAGQIIKVSAGIENKSDKTTGHVVASLMQKVTYNTKKQTYDLRSVAEVEGPGVKGGNKSE 237

  Fly   255 HNLPRGELQNFQHLHMLQVPQTAATLTVAGCACLQLNYEVEVLVTTQQEKRLIAARMPVIIGNVT 319
            .|         |.:.:..:|.:    :::....:|:.|.::|.:...:    :|..:|:.||:|.
Zfish   238 WN---------QQIIVPALPHS----SLSDGNLIQICYYIQVYLKYPE----VALTLPICIGSVA 285

  Fly   320 --PPCPGKLLMQEPIDG----TAPEPTPPVETASTLIP 351
              |..|.......|:..    .||.|:.|...||.|.|
Zfish   286 LDPSQPSHSQTVAPMPAPRITPAPSPSAPESEASNLPP 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18744NP_652647.2 Arrestin_N 5..141 CDD:451447 30/142 (21%)
Arrestin_C 179..318 CDD:460676 28/138 (20%)
arrdc1aXP_068077148.2 None

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