DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18735 and tmprss4

DIOPT Version :10

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:XP_012822151.1 Gene:tmprss4 / 733869 XenbaseID:XB-GENE-940762 Length:785 Species:Xenopus tropicalis


Alignment Length:312 Identity:105/312 - (33%)
Similarity:152/312 - (48%) Gaps:51/312 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SDPEKILNNLAQLRQSSFL--DWIQSILGPEV---PAEWSSPAKRE-----CAECSCGNINTRHR 82
            |:|.....:::.|..||.|  ..:|.:....:   |..|.|....:     ||.|..|  :.:.|
 Frog   489 SEPVSGTVSISDLSTSSALLYSTVQVLSDKSIQVNPTVWGSCTSGQVVSLRCAACGTG--HKQER 551

  Fly    83 IVGGQETEVHEYPWMIMLMWFGNFYCGASLVNDQYALTAAHCVNGFYHRLITVRLLEHNRQDSHV 147
            |:||..:::.:|||.:.|.:.|...||.|::|.::.|.||||.                  |...
 Frog   552 IIGGSNSDILKYPWQVSLQYMGQHICGGSILNSRWILCAAHCF------------------DRGQ 598

  Fly   148 KIVDR----------------RVSRVLIHPKYSTRNFDSDIALIRFNEPVRLGIDMHPVCMPTPS 196
            :.|||                .|.::.::.||.|....:||||::....:.....:.|||:|...
 Frog   599 RQVDRWRVQYGITTLTYLFGTFVDKIFLNSKYVTDQKPNDIALLQLKSDIVASASVQPVCLPGYD 663

  Fly   197 EN-YAGQTAVVTGWGALSEGG-PISDTLQEVEVPILSQEECRNSNYGESKITDNMICAGYVEQGG 259
            .| ..|....|||||...||| .::..||||.:.::|...| |..|| .:|.|.|:|||.: .||
 Frog   664 NNLVVGAVLYVTGWGHTVEGGAALASQLQEVAISLISSTTC-NQEYG-GQILDTMLCAGKI-AGG 725

  Fly   260 KDSCQGDSGGPMHVLGSGDAYQLAGIVSWGEGCAKPNAPGVYTRVGSFNDWI 311
            .|:||||||||:..||....::..||||||:||.:||..||||.|.||.:||
 Frog   726 ADTCQGDSGGPLVSLGQSSHWEQVGIVSWGDGCGRPNRVGVYTDVQSFLNWI 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 83..314 CDD:238113 90/247 (36%)
tmprss4XP_012822151.1 PHA03247 <32..358 CDD:223021
LDLa 402..434 CDD:238060
SRCR_2 453..545 CDD:470597 13/55 (24%)
Tryp_SPc 551..777 CDD:214473 89/246 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.