DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18735 and Prss55

DIOPT Version :10

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_001419989.1 Gene:Prss55 / 683415 RGDID:1586875 Length:321 Species:Rattus norvegicus


Alignment Length:275 Identity:84/275 - (30%)
Similarity:139/275 - (50%) Gaps:32/275 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 RIVGGQETEVHEYPWMIMLMWFGNFYCGASLVNDQYALTAAHCVNGFYHR-----LITVRLLEHN 141
            ||:||||.||.|:||.:.:....:.:||.|::::.:.||.|||   ||.:     .:|||:   .
  Rat    34 RIIGGQEAEVGEFPWQVSIQENDHHFCGGSILSEWWILTVAHC---FYSQELSPTELTVRV---G 92

  Fly   142 RQDSHVKIVDRRVSRVLIHPKYSTRNFDSDIALIRFNEPVRLGIDMHPVCMPTPSENYAGQTAVV 206
            ..|.....::.:|:.::.|..:...:.|:||||:....|:.......|:|||......:.|...|
  Rat    93 TNDLTTSPMELQVTNIIRHKDFKRHSMDNDIALLLLANPLTFNEQTVPICMPLQPTPPSWQECWV 157

  Fly   207 TGWGALSEGGPISDTLQEVEVP--ILSQEECRNSNYGESKITDNMICAGYVEQGGKDSCQGDSGG 269
            .|||..:.....|..:..::||  |...:||...   ...:|.||:||.|..: ..|:|||||||
  Rat   158 AGWGTTNSADKESMNMDLMKVPMRITDWKECLQL---FPSLTTNMLCASYGNE-SFDACQGDSGG 218

  Fly   270 PM--HVLGSGDAYQLAGIVSWGEGCAKPNAPGVYTRVGSFNDWIAENTRDACSCAQPEAAGEPA- 331
            |:  :....|..||: ||:|||:.|.:..:||:||.:.::..||.:.|         :..|:|. 
  Rat   219 PLVCNQESDGRWYQV-GIISWGKSCGQKGSPGIYTVLANYILWIEKIT---------QIEGKPLD 273

  Fly   332 --SPMETTEQGDQEN 344
              |.|.:.::..::|
  Rat   274 LNSQMVSVKKKTRKN 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 83..314 CDD:238113 77/239 (32%)
Prss55NP_001419989.1 Tryp_SPc 35..264 CDD:238113 77/239 (32%)

Return to query results.
Submit another query.