DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18735 and F12

DIOPT Version :10

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_067464.2 Gene:F12 / 58992 MGIID:1891012 Length:597 Species:Mus musculus


Alignment Length:262 Identity:96/262 - (36%)
Similarity:138/262 - (52%) Gaps:29/262 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 CG-----NINTRHRIVGGQETEVHEYPWMIMLMWFGNFYCGASLVNDQYALTAAHCV-NGFYHRL 132
            ||     .:::..|:|||.......:|::..|.| ||.:|..||:...:.||||||: |......
Mouse   341 CGQRFRKGLSSFMRVVGGLVALPGSHPYIAALYW-GNNFCAGSLIAPCWVLTAAHCLQNRPAPEE 404

  Fly   133 ITVRLLE--HNRQDSHVKIVDRRVSRVLIHPKYSTRNFDSDIALIRFNEP-----VRLGIDMHPV 190
            :||.|.:  ||:.....:.:..|..|  :|..:|:..:..|:||:|..|.     ..|...:.||
Mouse   405 LTVVLGQDRHNQSCEWCQTLAVRSYR--LHEGFSSITYQHDLALLRLQESKTNSCAILSPHVQPV 467

  Fly   191 CMPT----PSENYAGQTAVVTGWGALSEGG-PISDTLQEVEVPILSQEECRNSNYGESKITDNMI 250
            |:|:    |||....:   |.|||...||. ..|..|||.:||.::.:.|.|||.....|...|:
Mouse   468 CLPSGAAPPSETVLCE---VAGWGHQFEGAEEYSTFLQEAQVPFIALDRCSNSNVHGDAILPGML 529

  Fly   251 CAGYVEQGGKDSCQGDSGGPMHVLGSGDA-YQLA--GIVSWGEGCAKPNAPGVYTRVGSFNDWIA 312
            |||::| ||.|:||||||||: |...|.| :||.  |::|||.||...|.|||||.|.::..||.
Mouse   530 CAGFLE-GGTDACQGDSGGPL-VCEEGTAEHQLTLRGVISWGSGCGDRNKPGVYTDVANYLAWIQ 592

  Fly   313 EN 314
            ::
Mouse   593 KH 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 83..314 CDD:238113 93/246 (38%)
F12NP_067464.2 FN2 41..88 CDD:238019
EGF_CA 96..131 CDD:238011
FN1 133..173 CDD:238018
EGF 178..206 CDD:394967
KR 217..295 CDD:412161
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 306..338
Tryp_SPc 355..594 CDD:238113 93/246 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.