DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18735 and LOC560023

DIOPT Version :9

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:XP_021325702.1 Gene:LOC560023 / 560023 -ID:- Length:271 Species:Danio rerio


Alignment Length:297 Identity:103/297 - (34%)
Similarity:145/297 - (48%) Gaps:50/297 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ATPSLRSASDPEKILNNLAQLRQSSFLDWIQSILGPEVPAEWSSPAKRECAECSCGNINTRHRIV 84
            ||...|||:       .:|||.      |:..:|...|...:|                  .||:
Zfish    12 ATILSRSAA-------GMAQLL------WVFLVLAVMVRDAFS------------------QRII 45

  Fly    85 GGQETEVHEYPWMIMLMWFGNFYCGASLVNDQYALTAAHCVNGFYHRLITVRLLEHNR--QDSHV 147
            ||||...:...:.:.|......:||.:|:..|:.||||||...  ..:|.|.|.|||.  ::...
Zfish    46 GGQEVVPYSIKYQVSLQVDRKHFCGGTLIQPQWVLTAAHCWRP--ASVIQVVLSEHNLAVEEGFE 108

  Fly   148 KIVDRRVSRVLIHPKYSTRNFDSDIALIRFNEPVRLGIDMHPVCMPTPS--ENYAGQTAVVTGWG 210
            ::.  .|::|..|..|:.:.|::||.:|:...|.::...:.|..:||..  |...|.:..|:|||
Zfish   109 QVC--TVAKVFSHVAYNPKTFNNDIMIIKLTAPAQINAYVQPALLPTADTPELAGGSSCTVSGWG 171

  Fly   211 ALS-EGGPISDTLQEVEVPILSQEECRNSNYGESKITDNMICAGYVEQGGKDSCQGDSGGPMHVL 274
            ... ....:|..|:.|:|.|.|  .|:...|  .::.||||||| ...|||||||||||||:.. 
Zfish   172 VTRLYNFYLSPILRAVDVEIFS--SCQLYYY--YRVNDNMICAG-SRFGGKDSCQGDSGGPLIC- 230

  Fly   275 GSGDAYQLAGIVSWGEGCAKPNAPGVYTRVGSFNDWI 311
               |.| |.||||||.|||.|..|||||:|.::|.||
Zfish   231 ---DGY-LEGIVSWGIGCALPYYPGVYTKVRNYNRWI 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 82..311 CDD:214473 89/233 (38%)
Tryp_SPc 83..314 CDD:238113 90/234 (38%)
LOC560023XP_021325702.1 Tryp_SPc 43..263 CDD:214473 89/233 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.