DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18735 and ctrb.3

DIOPT Version :10

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_001017724.1 Gene:ctrb.3 / 550419 ZFINID:ZDB-GENE-050417-229 Length:265 Species:Danio rerio


Alignment Length:235 Identity:99/235 - (42%)
Similarity:137/235 - (58%) Gaps:14/235 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 RIVGGQETEVHEYPWMIMLMWFGNF-YCGASLVNDQYALTAAHCVNGFYHRLITVRLLEHNRQDS 145
            |||.|:|...|.:||.:.|..|..| :||.||:|:.:.:|||||.....||:|   |.|||:..|
Zfish    33 RIVNGEEAVPHSWPWQVSLQDFTGFHFCGGSLINEFWVVTAAHCSVRTSHRVI---LGEHNKGKS 94

  Fly   146 HVK--IVDRRVSRVLIHPKYSTRNFDSDIALIRFNEPVRLGIDMHPVCMPTPSENYA-GQTAVVT 207
            :.:  |...:||:|..||:|::...::||||::...|..|...:.|||:...|:|:| |.|.|.:
Zfish    95 NTQEDIQTMKVSKVFTHPQYNSNTIENDIALVKLTAPASLNAHVSPVCLAEASDNFASGMTCVTS 159

  Fly   208 GWGALSEGGPIS-DTLQEVEVPILSQEECRNSNYGESKITDNMICAGYVEQGGKDSCQGDSGGPM 271
            |||........: |.||:|.:|:||.|:|:| ::| |.|.|.|||||   ..|..||.||||||:
Zfish   160 GWGVTRYNALFTPDELQQVALPLLSNEDCKN-HWG-SNIRDTMICAG---AAGASSCMGDSGGPL 219

  Fly   272 HVLGSGDAYQLAGIVSWGEGCAKPNAPGVYTRVGSFNDWI 311
             |....:.:.|.||||||.....|..||||.||....||:
Zfish   220 -VCQKDNIWTLVGIVSWGSSRCDPTMPGVYGRVTELRDWV 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 83..314 CDD:238113 98/234 (42%)
ctrb.3NP_001017724.1 Tryp_SPc 33..258 CDD:214473 98/233 (42%)

Return to query results.
Submit another query.