DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18735 and sdhaf4

DIOPT Version :9

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_001008179.1 Gene:sdhaf4 / 493541 XenbaseID:XB-GENE-1007482 Length:118 Species:Xenopus tropicalis


Alignment Length:93 Identity:23/93 - (24%)
Similarity:29/93 - (31%) Gaps:30/93 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 DSCQGDSGGPMHVLGSGDAYQLAGIVSWGEGCAKPNAPGVYTRVGSFNDWIAENTR--------- 316
            :||:..|....|           .|....:...||..|     .|.|:|  :|.|.         
 Frog    38 NSCRALSHNSQH-----------NIKGTKQPLKKPTTP-----QGKFDD--SEQTTLEKNPLEKF 84

  Fly   317 -DACSCAQPEAAGEPASPMETTEQGDQE 343
             |..:....|..| |..| |.|..||.|
 Frog    85 PDDINPVTKEKGG-PRGP-EPTRYGDWE 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 82..311 CDD:214473 11/49 (22%)
Tryp_SPc 83..314 CDD:238113 11/52 (21%)
sdhaf4NP_001008179.1 DUF1674 76..118 CDD:311723 10/37 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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