DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18735 and st14

DIOPT Version :10

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:XP_012821897.2 Gene:st14 / 448647 XenbaseID:XB-GENE-1008784 Length:845 Species:Xenopus tropicalis


Alignment Length:274 Identity:106/274 - (38%)
Similarity:156/274 - (56%) Gaps:16/274 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 PEVPAE--WSSPAKRECAECSCGN--INTRHRIVGGQETEVHEYPWMIMLMWFGNFY-CGASLVN 114
            ||...|  .|..:....|:|:||.  ...:.|||||...:..|:||.:.|...||.: ||||||:
 Frog   573 PECDGENDCSDGSDEISAKCNCGKRPFTKKSRIVGGVNADTGEFPWQVSLHVKGNKHTCGASLVS 637

  Fly   115 DQYALTAAHCVNGFYH------RLITVRLLEHNRQDSHVK-IVDRRVSRVLIHPKYSTRNFDSDI 172
            ....::||||......      .|.|..|..|::...:.| :|:|::.|::.|..::...:|:||
 Frog   638 PTMLISAAHCFQDDQSMRYSDASLWTAYLGLHDQAQLNSKDVVERKIKRIMAHIGFNDNTYDNDI 702

  Fly   173 ALIRFNEPVRLGIDMHPVCMPTPSENY-AGQTAVVTGWGALSEGGPISDTLQEVEVPILSQEECR 236
            :::...:||.....:.|:|:|..:.:: .|:...|||||||.|||..:..||:.|:.|::|.||.
 Frog   703 SVLELEKPVDYTDFIQPICIPESTHDFPVGKPIWVTGWGALKEGGGAAVILQKAEIRIINQTECN 767

  Fly   237 NSNYGESKITDNMICAGYVEQGGKDSCQGDSGGPMHVLGSGDAYQLAGIVSWGEGCAKPNAPGVY 301
            ....|:  :|..|:|||:| .||.|:||||||||:..:...:...||||||||||||:.|.||||
 Frog   768 KLLDGQ--LTPRMLCAGFV-SGGIDACQGDSGGPLSSVELNNKVYLAGIVSWGEGCARRNKPGVY 829

  Fly   302 TRVGSFNDWIAENT 315
            |||....|||.:.|
 Frog   830 TRVAMMRDWIRDKT 843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 83..314 CDD:238113 96/239 (40%)
st14XP_012821897.2 SEA 76..167 CDD:460188
CUB 216..320 CDD:238001
CUB 328..432 CDD:238001
LDLa 442..474 CDD:238060
LDLa 476..511 CDD:238060
LDLa 513..547 CDD:238060
LDLa 554..587 CDD:197566 4/13 (31%)
Tryp_SPc 604..839 CDD:214473 95/237 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.