DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18735 and pamr1

DIOPT Version :9

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_001004944.1 Gene:pamr1 / 448349 XenbaseID:XB-GENE-1012813 Length:722 Species:Xenopus tropicalis


Alignment Length:398 Identity:94/398 - (23%)
Similarity:154/398 - (38%) Gaps:121/398 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ACATPSLRSASDPEKILNNLAQLRQ--------SSFLDWIQSILGPEVPA--------------- 59
            ||..|.:.... .:|:|.:|.|.|:        :||......||..:.||               
 Frog   347 ACKEPKVADLV-RQKVLPSLVQSRETPLHQLYSASFTKEKTDILPTKKPALPPGELPPGYQHLHT 410

  Fly    60 ----EWSSP-------AKRECAECS------------CGNINTRHRIVGGQETEVHEYPWMIMLM 101
                :..||       ::|.|.:..            ||.:...:....|::    .:||...|.
 Frog   411 QLQYDCVSPFYRRTGSSRRTCLKTGKWSGRAPSCIPICGKLENFNITQLGEQ----RWPWQAALY 471

  Fly   102 WFGN-------------FYCGASLVNDQYALTAAHCVNGF-YHRLITVRLLEHNRQDSHVKIV-- 150
            ...|             ..|..:|:|::..:.|||||... ...:|.|         |.:|:|  
 Frog   472 RRSNGVKDASLRKGSWVLVCSGALLNERTVVMAAHCVTDLGKSSIIKV---------SDMKVVLG 527

  Fly   151 ------DR--------RVSRVLIHPKYSTRNFDSDIALIRFNEPVRLGIDMHPVC------MPTP 195
                  ||        .:|.|:::|.|.....|||||:|:..:..|:...:.|||      |.|.
 Frog   528 KFYRDDDREEKSQQHLHISAVIVNPNYDPILLDSDIAVIKLLDKARVSDYVQPVCLTLATEMITS 592

  Fly   196 SENYAGQTAVVTGWGALSE---GGPISDTLQEVEVPILSQEECRNSNYGES----KITDNMICAG 253
            .:.|   |.|::||..||:   .|..::|::...:..:...:| ...|.|:    .:|::|.||.
 Frog   593 PQEY---TIVISGWKILSDPRAPGSKNETIRAGAIEPVDSLQC-EQQYEENGISVSVTESMFCAK 653

  Fly   254 YVEQGGKDSCQGDSGGPMHVL--------GSGDAYQLAGIVSWG--EGCAKPNAPGVYTRVGSFN 308
            ...:.....|..::||...||        ||   :.|.|:||||  :.|.|....| ||:|.:|.
 Frog   654 QEPRPSPSICPSETGGITTVLLPSPTSPEGS---WHLIGLVSWGYDKSCRKDLYTG-YTKVVTFK 714

  Fly   309 DWIAENTR 316
            :|:.:|.:
 Frog   715 EWLEKNMK 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 82..311 CDD:214473 72/281 (26%)
Tryp_SPc 83..314 CDD:238113 73/283 (26%)
pamr1NP_001004944.1 CUB 130..236 CDD:238001
EGF_CA 242..274 CDD:238011
CCP 282..344 CDD:214478
CCP <410..445 CDD:153056 4/34 (12%)
Tryp_SPc 463..720 CDD:238113 72/273 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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