DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18735 and grass

DIOPT Version :10

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster


Alignment Length:316 Identity:102/316 - (32%)
Similarity:151/316 - (47%) Gaps:63/316 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GPEVPAEWSSPAKRE-CAECS------CGNINTRH---------------------RIVGGQETE 90
            |.:|||:::|..::. |.|.:      |.:.|.:|                     |:..|.|.:
  Fly    62 GQKVPADYASYLQKALCGEFNGVRHFCCPSANIQHNSKVMSLFKDENFDCGNFLSQRVSNGYEVK 126

  Fly    91 VHEYPWMIMLMW--FG--NFYCGASLVNDQYALTAAHCVNGFYHRLITVRLLEHN-------RQD 144
            :...|||.:|.:  ||  .|.||.::::::|.|||||||:|..:.|..:||.||.       ||.
  Fly   127 LSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQ 191

  Fly   145 SHVK-----IVDRRVSRVLIHPKYSTRNFDSDIALIRFNEPVRLGIDMHPVCMPTPSE--NYAGQ 202
            ...|     :|:..:.:.|||.||..|:...||||::.|..|.....:.|:|:|...|  ..|.|
  Fly   192 GRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQ 256

  Fly   203 --TAVVTGWGALSEGGPISDTLQEVEVPILSQEECRNSNYGESKITDNMICAGYVEQGG--KDSC 263
              |..|||||. :|.|..||.|.:..||:..:..|  |......:..:.:|.|    ||  :|||
  Fly   257 ISTYFVTGWGT-TENGSSSDVLLQANVPLQPRSAC--SQAYRRAVPLSQLCVG----GGDLQDSC 314

  Fly   264 QGDSGGPMHV----LGSGDAYQLA-GIVSWG-EGCAKPNAPGVYTRVGSFNDWIAE 313
            :||||||:..    ||......:. ||||.| ..|.:.:.||:||.||.:..||.:
  Fly   315 KGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYVQWITD 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 83..314 CDD:238113 91/259 (35%)
grassNP_651543.1 CLIP 32..90 CDD:197829 7/27 (26%)
Tryp_SPc 121..371 CDD:238113 91/257 (35%)

Return to query results.
Submit another query.